Transcription factor: SigX

Factor type	ND
SWISS-PROT	P35165
SubtiList	BG10536
Consensus seq.	TGTAACN(17)CGAC
Comment	ECF-type sigma factor
Link to	Phylogenetic profile, Weight matrix, Motif alignment & Similar conserved hexameric motifs

Operon	Regulated Gene	Absolute position	Location	Binding seq.(cis-element)	Experimental evidence
abh	abh	`1517073..1517114`	`-40:+2`	CGGGAAACTTTTTCAAAGTTTCATTCGTCTACGATATATTGA	Huang X & Helmann JD (1998): PE RG Huang X, et al. (1998): RO
csbB	csbB	`930038..930079`	`-36:+6`	ATTGTAACAAAAAACAGGTTTAAACGACTTTAAAAAAAGGAA	Huang X & Helmann JD (1998): PE RG DB
yabMNOPQ-divIC-yabR	divIC	`69016..69057`	`-36:+6`	TTTGAAACTTCTTCCTGTGAAAATGCGTCTAACTTTTAGACG	Huang X & Helmann JD (1998): PE RG DB Huang X, et al. (1998): RO Cao M, et al. (2002): AR
dltABCDE	dltA	`3951054..3951103`	`-38:+12`	AAAATGAAACTTTTTGAGCATCTGATCGTCAAATAATCATGTGATTGTCG	Cao M & Helmann JD (2004): ROMA RG PE
lytR	lytR	`3662191..3662232`	`-36:+6`	AATGAAACTTTTTTTTATAAAAAACGACTATTTTAGGATTTC	Huang X & Helmann JD (1998): DB RG PE Lazarevic V, et al. (1992): PE
pbpX	pbpX	`1765049..1765087`	None	TTTTTGACAACTTTTTTAGGGCTTTATTCGTCTAACAAA	Cao M & Helmann JD (2004): ROMA RG
pssA-ybfM-psd	pssA	`247660..247706`	`-39:+8`	TTCCTGTAACGCTATTCGATCACTATCGTCAAATAATATAGATGGTT	Cao M & Helmann JD (2004): ROMA RG
rapD	rapD	`3743292..3743333`	`-37:+5`	AATGTAACCAACTGTCAATGAGAGCCGTCAAAAGTTATGATA	Huang X & Helmann JD (1998): RG DB PE RO
sigX-rsiX	sigX	`2414418..2414459`	`-37:+5`	AATGTAACTTTTCAAGCTATTCATACGACAAAAAAGTGAACG	Huang X, et al. (1997): RO, in-vitro transcription, PE DB RG Huang X & Helmann JD (1998): SDM RG DB PE
yjbCD	yjbC	`1226135..1226178`	`-40:+4`	AAAAATGAAACCATGGCGGAAGTTCGCACGTCTTTATAGATGTA	Antelmann H, et al. (2000): PE NB Cao M, et al. (2002): HM RO RG DB Cao M, et al. (2002): AR
yqjL	yqjL	`2476093..2476130`	None	TTAGAGAAACGATCGGCTAAGGTTCTCCGTCTCCCTAG	Cao M, et al. (2002): ROMA Cao M, et al. (2002): AR
yrhH	yrhH	`2777728..2777772`	`-39:+6`	TCTATTGAAACATTTTTCAATACATTGCCGTCTAGTTGGTACCTT	Huang X & Helmann JD (1998): RO Huang X, et al. (1998): RO Cao M, et al. (2002): AR
ywbLMN	ywbN	`3927055..3927099`	`-39:+6`	AAATACAAAACAAATGATCAGTCCTATACGTCTTATGATAAATTA	Huang X & Helmann JD (1998): RO PE Huang X, et al. (1998): RO
ywnJ	ywnJ	`3758641..3758693`	`-44:+9`	TTTTTTTCTGTTACTTTTTGCTTTGTTTTACCGTCTATGTAGTTACATGTAGG	Cao M & Helmann JD (2004): ROMA RG PE Cao M, et al. (2002): AR
ywoA	ywoA	`3757506..3757549`	`-38:+6`	TTATTTGAAACTTTTCATGAGTAAGATTAGTCTACTAAATATAA	Cao M & Helmann JD (2002): ROMA AR DB RG PE HB Cao M, et al. (2002): AR Ohki R, et al. (2003): NB RG DB