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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | qcrABC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| qcrA | bfcA, petC | - | 2363785..2364288 | menaquinol:cytochrome c oxidoreductase (iron-sulfur subunit) | COG0723 | qcrA-BAC |
| qcrB | bfcB, petB | - | 2363109..2363783 | menaquinol:cytochrome c oxidoreductase (cytochrome b subunit) | COG1290 | |
| qcrC | bfcC, petD | - | 2362307..2363074 | menaquinol:cytochrome c oxidoreductase (cytochrome b/c subunit) | COG2010 | qcrC-BAC |
| Operon evidence: | Northern blotting (2.0 kb transcript) |
|---|---|
| Reference: | Yu J, et al. (1995) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| ResD | Positive | ND | ND | ND |
Sun G, et al. (1996): DB HB |
| SigA | Promoter | -39:+6 | 2364351..2364395 | TATATTGACCTTGCTGAGAGATTCATATATTATGAGGGTGTCTAG |
Yu J, et al. (1995): PE HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAAAAGCTGACCCGGCGTCAGCTTTTTTATATGGACA >>>>>> <<<<<< |
qcrC |
|