Regulated Operon: sdp

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yvaW sdpA + 3463320..3463796

 
yvaX sdpB + 3463793..3464764

 
yvaY sdpC + 3464807..3465418

 

Operon evidence: Genome analysis
Reference: Gonzalez-Pastor JE, et al. (2003)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
AbrB Negative ND ND ND Fujita M, et al. (2005): RG DB
Rok Negative ND ND ND Albano M, et al. (2005): RG AR DB GS
Spo0A Negative ND ND ND Fujita M, et al. (2005): OV RG GS
Molle V, et al. (2005): ChIP-on-chip, AR GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
TAATCCATTATAATTGAGTGTCTTGCGGATTGCTCCGCAAGACACTTTTTCAACGTGAAC
                 >>>>>>>>>>>>    <<<<<<<<<<<<
3465433..3465460
15..42
-23.4
 yvaY

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai