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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | spoIID |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| spoIID | spoIIC | - | 3775745..3776776 | COG2385 |
| Operon evidence: | integrational plasmids |
|---|---|
| Reference: | Lopez-Diaz I, et al. (1986) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -39:+4 | 3776804..3776846 | AGAGTCATATTAGCTTGTCCCTGCCCATAGACTAGACTAGAGT |
Rong S, et al. (1986): RO S1 |
| SpoIIID | Negative | -60:+1 | 3776807..3776867 | ATAAAGTTTCTGTCCAAAACGAGAGTCATATTAGCTTGTCCCTGCCCATAGACTAGACTAG |
Eichenberger P, et al. (2004): FT GS AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGACGCTCATTGGGCGTCTTTTTCTGTTCCTGA >>>>>>> <<<<<<< |
spoIID |
|