Regulated Operon: spoVB

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
spoVB spoIIIF + 2828790..2830346
COG2244  

Operon evidence: upstream and downstream genes are in opposite directions
Reference: Popham DL & Stragier P (1991)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter ND 2828712..2828754 CTTGTCATGCTTGGACGACATATACGCATATCTTTATTGTATA Popham DL & Stragier P (1991): RG
SpoIIID Negative ND ND ND Eichenberger P, et al. (2004): GS AR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CGATAATGGTCACGTGCGGTGCCCATCTTTTTCATCAATATA
     >>>>>>>>     <<<<<<<<
2830346..2830366
0..20
-8.1
spoVB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai