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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | spoVD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| spoVD | + | 1583518..1585455 | penicillin-binding protein | COG0768 | spoVD-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Daniel RA & Errington J (1993) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -37:+7 | 1583453..1583496 | ATCGTTCTACCTGTCCAAATTCAGGCATAAAATGAAACAAGCCT |
Daniel RA, et al. (1994): RG DB OV PE |
| SpoIIID | Negative | -33:-21 | 1583457..1583475 | TTCTACCTGTCCAAATTCA |
Zhang B, et al. (1997): RO FT GS |
| SpoIIID | Negative | -9:+8 | 1583481..1583497 | AAAATGAAACAAGCCTA |
Zhang B, et al. (1997): RO FT GS |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAGGAGGCAGCCGATTGATTCGGGCTGCCTATTCTTTTATTGCAGA >>>>>>>>>> <<<<<<<<<<< |
spoVD |
|