Regulated Operon: yhcOP

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yhcO
+ 989107..989406

 
yhcP
+ 989397..990014

 

Operon evidence: Genome analysis; downstream gene is on the opposite strand
Reference:
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -39:+11 988970..989019 AATGACACACTGCGAACTCAGGCTGCATAGAGTAAAAATAAAAAGGTACA Eichenberger P, et al. (2004): Race-PCR
SigK Promoter -39:+11 988970..989019 AATGACACACTGCGAACTCAGGCTGCATAGAGTAAAAATAAAAAGGTACA Eichenberger P, et al. (2004): Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
AATGAATTTCGCAGCTGTTCCATATCCTGCGCATCAAGCTGAGGAACCTGGTAATAGCCGTGTTTGTTTTGGTATAG
          >>>>>>>>>>>>>>>>>>>>>>     <<<<<<<<<<<<<<<<<<<<<<<<
990020..990070
6..56
-20.9
 yhcP

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai