Regulated Operon: yitCD

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yitC
+ 1171955..1172641
COG2045  
yitD
+ 1172638..1173396
COG1809  

Operon evidence: Genome analysis; downstream genes are on the opposite strand
Reference:
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -40:+13 1171885..1171937 TGCGGAACCATTAAGAGCCCGGCTGAATATGCTTTTTAGCAAAATGGTTTTAT Eichenberger P, et al. (2004): Race-PCR
SigK Promoter -40:+13 1171885..1171937 TGCGGAACCATTAAGAGCCCGGCTGAATATGCTTTTTAGCAAAATGGTTTTAT Eichenberger P, et al. (2004): Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
TGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCG
           >>>>>>>>>>>>>>>        <<<<<<<<<<<<<
1173403..1173438
7..42
-25.7
 yitD

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai