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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ylbJ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ylbJ | - | 1569879..1571105 | COG3314 |
| Operon evidence: | upstream and downstream genes are in the opposite direction |
|---|---|
| Reference: | Genbank Z98682 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -39:+9 | 1571198..1571245 | TATGGTCTAAACTGAACCCCTATGCTCGTATATTAGTACAAAGAATCA |
Eichenberger P, et al. (2003): AR, 5'-RACE-PCR |
| SpoIIID | Negative | ND | ND | ND |
Eichenberger P, et al. (2004): GS AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TGACAAACGGAACAAAAAAAGGATGAGTCAAAACCCTCATCCTTGTCTGAATTTTTG >>>>>>> <<<<<<< |
ylbJ |
|