Regulated Operon: ypqA

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ypqA
+ 2336774..2337193

 

Operon evidence: Genome analysis; upstream and downstream gene are on the opposite strand
Reference: Genbank L47838
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -37:+12 2336718..2336766 TTTATAACAACATCTGGCATAGACGCATAATCTGGTTAAAAAAGGCGGT Eichenberger P, et al. (2004): Race-PCR
SigK Promoter -37:+12 2336718..2336766 TTTATAACAACATCTGGCATAGACGCATAATCTGGTTAAAAAAGGCGGT Eichenberger P, et al. (2004): Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
CTTTCCAAAAAATAAGCATGAATGAACGATTCATTCATGCTTCTATCATTTAAAA
               >>>>>>>>>>>   <<<<<<<<<<<
2337184..2337208
-9..15
-16.4
 ypqA

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai