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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yqjL |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yqjL | + | 2476158..2476919 | COG0596 |
| Operon evidence: | Northern blotting; downstream gene is on the opposite strand |
|---|---|
| Reference: | BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigM | Promoter | ND | ND | ND |
Cao M, et al. (2005): RG DB Cao M, et al. (2002): AR |
| SigW | Promoter | ND | 2476093..2476130 | TTAGAGAAACGATCGGCTAAGGTTCTCCGTCTCCCTAG |
Cao M, et al. (2002): RO Cao M, et al. (2002): AR |
| SigX | Promoter | ND | 2476093..2476130 | TTAGAGAAACGATCGGCTAAGGTTCTCCGTCTCCCTAG |
Cao M, et al. (2002): ROMA Cao M, et al. (2002): AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AGACCGGGCCGTAAGGGATTCCCGGTCTTTTATATTATTTTGT >>>>>>>>>>> <<<<<<<< |
yqjL |
|