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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yrhH |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yrhH | - | 2777104..2777646 | COG0500 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Huang X & Helmann JD (1998), Huang X, et al. (1998) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigW | Promoter | -39:+6 | 2777728..2777772 | TCTATTGAAACATTTTTCAATACATTGCCGTCTAGTTGGTACCTT |
Huang X & Helmann JD (1998): DB RG Huang X, et al. (1998): RO Cao M, et al. (2002): AR |
| SigX | Promoter | -39:+6 | 2777728..2777772 | TCTATTGAAACATTTTTCAATACATTGCCGTCTAGTTGGTACCTT |
Huang X & Helmann JD (1998): RO Huang X, et al. (1998): RO Cao M, et al. (2002): AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GGAAATATATCCAAGATCCTCGTATTAGGATTTGGGTATATTTTCTTAATTTTTT >>>>>>>>>>>>>>> <<<<<<<<<<<<<< |
yrhH |
|