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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ywbLMN |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ywbL | ipa-27d | - | 3928128..3929573 | COG0672 | ||
| ywbM | ipa-28d | - | 3926974..3928131 | COG2822 | ||
| ywbN | ipa-29d | - | 3925705..3926955 | COG2837 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Presecan E, et al. (1997), Huang X & Helmann JD (1998), Huang X, et al. (1998), Baichoo N, et al. (2002) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| Fur | Negative | ND | 3929575..3929624 | CTATGATTATGTTATACAATGATAATCATTTTCAATTATAGGAGGAACAT |
Baichoo N, et al. (2002): FT Ollinger J, et al. (2006): DB SDS-PAGE |
| SigW | Promoter | -39:+6 | 3927055..3927099 | AAATACAAAACAAATGATCAGTCCTATACGTCTTATGATAAATTA |
Huang X, et al. (1998): RO Cao M, et al. (2002): ROMA AR RG PE |
| SigX | Promoter | -39:+6 | 3927055..3927099 | AAATACAAAACAAATGATCAGTCCTATACGTCTTATGATAAATTA |
Huang X & Helmann JD (1998): RO PE Huang X, et al. (1998): RO |
|