Transcription factor: DnaA

Factor type ND
SWISS-PROT P05648
SubtiList BG10065
Consensus seq. TTAT(C/A)CACA
Comment None
Link to Phylogenetic profile

Operon Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
dnaAN dnaA SigA Negative 4214617..4214640 -170:-147 TCACGCATGTGGATATCTTTTTCG Fukuoka T, et al. (1990): FT (medium)
dnaAN dnaA SigA Negative 11..37 -146:-120 GCTTTTTTTAGTATCCACAGAGGTTAT Fukuoka T, et al. (1990): FT (medium)
dnaAN dnaA SigA Negative 24..50 -133:-107 TCCACAGAGGTTATCGACAACATTTTC Fukuoka T, et al. (1990): FT (medium)
dnaAN dnaA SigA Negative 58..77 -99:-80 CAACCCCTGTGGACAAGGTT Fukuoka T, et al. (1990): FT (medium)
dnaAN dnaA SigA Negative 93..121 -64:-36 CCGCTTTGTGGATAAGATTGTGACAACCA Fukuoka T, et al. (1990): FT (strong)
dnaAN dnaA SigA Negative 186..219 +30:+63 TTCCTCTTTATCCACAAAGTGTGGATAAGTTGTG Fukuoka T, et al. (1990): FT (strong)
dnaAN dnaA SigA Negative 246..263 +80:+97 AGGTTGTCCACAAGTTGT Fukuoka T, et al. (1990): FT (medium)
dnaAN dnaA SigA Negative 1767..1837 between dnaA and dnaN TCGGGGAAAGTGTGAATAACTTTTCGGAAGTCATACACAGTCTGTCCACATGTGGATAGGCTGTGTTTCCT Fukuoka T, et al. (1990): FT (medium)
dnaAN dnaA SigA Negative 1843..1871 between dnaA and dnaN TTTCACAACTTATCCACAAATCCACAGGC Fukuoka T, et al. (1990): FT (strong)
sda sda SigA Negative 2646449..2646554 -146:-41 AGGTGTGGATAAATTTACACACACTATCCACTCTTATTACATCACTCTTTAGACAAATTATAAACACGATACTCACAAGTTATCCACTTTTTGGTGTGGATAACAG Burkholder WF, et al. (2001): RG HM DB




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai