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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | cotA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| cotA | pig | - | 683462..685003 | COG2132Q |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Genbank AB007638 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| GerE | Negative | ND | ND | ND |
Zheng L, et al. (1992): DB RO |
| SigK | Promoter | -42:+6 | 685033..685080 | ATTTTTTGTAACCATCACGTCCTTATTGTCATTAACTATAGTACCAAT |
Sandman K, et al. (1988): RG DP S1 |
| SpoIIID | Negative | ND | ND | ND |
Halberg R, et al. (1995): RO |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| ACAAACTTGCCTCTAGCAGGCAAGTTTTTTCTTTATGAA >>>>>>> <<<<<<< |
cotA |
|