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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | csbX-bofC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| csbX | - | 2837469..2838776 | COG2223P | |||
| bofC | - | 2836909..2837421 |
| Operon evidence: | insertional mutant and examination of bofC expression; plasmids and merodiploid |
|---|---|
| Reference: | Gomez M & Cutting SM (1997), Gomez M & Cutting SM (1997) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigB | Promoter | -50:+10 | 2838793..2838852 | TTTTAATCTAACAGGATTACAATTCAGCAAGCTTGGGTATATACTCCATTGATACTTTAA |
Gomez M & Cutting SM (1997): PE |
| SigF | Promoter | -42:+5 | 2837442..2837488 | ATAAAACGGTTAAGCAGTAGCCTCTTTGGTCAAACTAATCATAAACG |
Gomez M & Cutting SM (1997): PE NB |
| SigG | Promoter | -42:+5 | 2837442..2837488 | ATAAAACGGTTAAGCAGTAGCCTCTTTGGTCAAACTAATCATAAACG |
Gomez M & Cutting SM (1997): PE RG |
| SpoVT | Negative | ND | ND | ND |
Bagyan I, et al. (1996): DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TTGAAGACATGTATTCATGTCTTTTTTTTCGTGAAA >>>>>> <<<<<< |
bofC |
|