 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | epr |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| epr | ipa-15r | + | 3939869..3941806 | COG1404O |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Sloma A, et al. (1988), Crutz AM & Steinmetz M (1992) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| Hpr | Negative | -332:-304 | 3939509..3939537 | AGACAGACCCGATAATAATCAGCGGCATG |
Kodgire P, et al. (2006): DP RG GS DB SDM |
| SigD | Promoter | -43:+8 | 3939798..3939848 | CCTTCTTACTATTAATCTCTCTTTTTTTCTCCGATATATATATCAAACATC |
Dixit M, et al. (2002): PE |
| SinR | Negative | -407:-375 | 3939434..3939466 | CGGCCCACTCGTTCCCAAACACACTCGCCATGA |
Kodgire P, et al. (2006): DP RG GS DB SDM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACCTTTAAGATTTGCATTCCAAGTCTTAAAGGTTTTTTTCATTCTAA >>>>>>>>>>>>> <<<<<<<<<<<<< |
epr |
|