Regulated Operon: ispA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ispA
- 2525789..2526679
COG0142H  

Operon evidence: Genome analysis
Reference:
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
DegU Positive ND ND ND Ruppen ME, et al. (1988): DB RG, protease activity
Hpr Negative ND ND ND Ruppen ME, et al. (1988): DB RG
Ipi Positive ND ND ND Shiga Y, et al. (1993): DB RG
SigA Promoter -47:+10 1387019..1387075 CAAATGGCTCTGTCCGAGCGCTTGCTTTTTTCATATAATATGAGGCAACACCCTTGA Koide Y, et al. (1986): S1

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TTACGTAGAAAAGCCTCTTTCTCTCATGGGAAAGAGGCTTTTTGTTGTGAGAA
            >>>>>>>>>>>    <<<<<<<<<<<
1385688..1385713
1140076..1140101
-19.5
ispA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai