Regulated Operon: cotA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
cotA pig - 683462..685003
COG2132Q  

Operon evidence: Genome analysis
Reference: Genbank AB007638
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
GerE Negative ND ND ND Zheng L, et al. (1992): DB RO
SigK Promoter -42:+6 685033..685080 ATTTTTTGTAACCATCACGTCCTTATTGTCATTAACTATAGTACCAAT Sandman K, et al. (1988): RG DP S1
SpoIIID Negative ND ND ND Halberg R, et al. (1995): RO

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
ACAAACTTGCCTCTAGCAGGCAAGTTTTTTCTTTATGAA
     >>>>>>>     <<<<<<<
683434..683452
10..28
-11.3
cotA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai