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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | cotC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| cotC | - | 1904995..1905195 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| GerE | Positive | -141:-126 | 1905347..1905362 | CGTTTGGGCCGATGAA |
Zheng L, et al. (1992): GS FT RO |
| GerE | Positive | -77:-56 | 1905277..1905298 | ATCATTTGGACAGCCCTTTTTT |
Zheng L, et al. (1992): GS FT RO |
| SigK | Promoter | -41:+6 | 1905216..1905262 | AACTGTCCAAGCCGCAAAATCTACTCGCCGTATAATAAAGCGTAGTA |
Zheng L, et al. (1992): PE Zheng LB & Losick R (1990): PE RG DP |
| SpoIIID | Negative | -86:-16 | 1905237..1905307 | TCTTTTTCTATCATTTGGACAGCCCTTTTTTCCTTCTATGATTTTAACTGTCCAAGCCGCAAAATCTACTC |
Ichikawa H, et al. (2000): GS FT |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TTTCCCCCGGCTATTGCCGGGTCTTTTTTGTTTGTGCA >>>>>> <<<<<< |
cotC |
|