Regulated Operon: | yabMNOPQ-divIC-yabR |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
yabM | + | 64817..66415 | COG2244R | |||
yabN | + | 66405..67874 | COG3956R | |||
yabO | + | 67877..68137 | COG1188J | |||
yabP | spoVUA | + | 68216..68518 | yabP-BAC | ||
yabQ | spoVUB | + | 68515..69150 | |||
divIC | + | 69168..69545 | COG2919D | |||
yabR | + | 69626..70012 | COG1098J | yabR-BAC |
Operon evidence: | Northern blotting (5.3 kb transcript) |
---|---|
Reference: | Asai K, et al. (2001) |
Comments: | Internal promoters in front of yabN (3.7 kb trancript), yabP (1.9 kb transcript), divIC (1.0 kb transcript), and yabR (0.5 kb transcript) |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
SigE | Promoter | -39:+6 | 68139..68183 | CTTGTTCTAAAAAAACCCCCCACCTCATACAATGCAGTAATAATG |
Asai K, et al. (2001): NB DB PE |
SpoIIID | Negative | ND | ND | ND |
Eichenberger P, et al. (2004): GS AR |
SigW | Promoter | -36:+6 | 69018..69059 | TTTGAAACTTCTTCCTGTGAAAATGCGTCTAACTTTTAGACG |
Huang X, et al. (1998): RO Cao M, et al. (2002): AR |
SigX | Promoter | -36:+6 | 69018..69059 | TTTGAAACTTCTTCCTGTGAAAATGCGTCTAACTTTTAGACG |
Huang X & Helmann JD (1998): PE RG DB Huang X, et al. (1998): RO Cao M, et al. (2002): AR |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
ATGAAGCATCCGTTCATCCCGACGGATGCTTTTTTATTATCCTC >>>>>>>>> <<<<<<<<< |
yabR |
|