 |
Copyright: Human Genome Center, Inst. Med.
Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Factor type | MerR |
|---|---|
| SWISS-PROT | ND |
| SubtiList | ND |
| Consensus seq. | TGTNA-------TNACA |
| Comment | originally identified as a repressor of glnRA operon; binds to the same sequence with TnrA (activator) |
| Link to | Phylogenetic profile, Weight matrix & Motif alignment |
| Operon | Regulated Gene | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|---|---|
| glnRA | glnR | SigA | Negative | 1877877..1877893 | -58:-42 | TGTTAAGAATCCTTACA |
Gutowski JC, et al. (1992): DB FT |
| glnRA | glnR | SigA | Negative | 1877900..1877916 | -35:-19 | TGACACATAATATAACA |
Gutowski JC, et al. (1992): DB FT |
| nasA | nasA | SigA | Negative | 362838..362856 | -58:-42 | GTGTCACAAAAACTTACAC |
Nakano MM, et al. (1995): DP SDM |
| nasBCDEF | nasB | SigA | Negative | 362838..362856 | -58:-42 | GTGTAAGTTTTTGTGACAC |
Nakano MM, et al. (1995): DP SDM |
| ureABC | ureA | SigA | Negative | 3769925..3769941 | +7:+23 | TGTAAACTTTTATAACA |
Wray LV Jr, et al. (1997): DB DP PE |
| ureABC | ureA | SigA | Negative | 3770030..3770046 | -99:-83 | TGTGAATAAATATAACA |
Wray LV Jr, et al. (1997): DB DP PE |
|