Transcription factor: YdiH

Factor type ND
SWISS-PROT ND
SubtiList ND
Consensus seq. TTTGTGAADTABTGAKCAAWDT
Comment None
Link to Phylogenetic profile

Operon Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
alsSD alsS SigA Negative 3711380..3711415 -59:-24 AAAGAGTGTATAGTGAAACTTATCACAAGATATTTA Reents H, et al. (2006): RG
cydABCD cydA SigA Negative 3979286..3979327 +64:+105 TTTTGACACATTTGTGAAATATTGAGCAATATTTTTTTCGTC Schau M, et al. (2004): RG FT
Larsson JT, et al. (2005): RG DB
Reents H, et al. (2006): RG
cydABCD cydA SigA Negative 3979251..3979292 +99:+140 TTTCGTCTATTTTGTGAATTACTGATCAAAGTCTCGGTTCTA Schau M, et al. (2004): RG FT
Larsson JT, et al. (2005): RG DB
Reents H, et al. (2006): RG
cydABCD cydA SigA Negative 3979219..3979260 +131:+172 CTCGGTTCTATTTGTGAAGTAGTGAGCAAATTAACAGTTTTA Schau M, et al. (2004): RG FT
Larsson JT, et al. (2005): RG DB
Reents H, et al. (2006): RG
ldh-lctP ldh SigA Negative 329676..329723 -39:+9 TCTCTTGCAAAAGTTTGTGAAGTGTTGCACAATATAAATGTGAAATAC Larsson JT, et al. (2005): RG DB
ldh-lctP ldh SigA Negative 329707..329760 -8:+46 ATATAAATGTGAAATACTTCACAAACAAAAAGACATCAAAGAGAAACATACCCT Larsson JT, et al. (2005): RG DB
ywcJ ywcJ SigA Negative 3905259..3905294 -59:-24 AAAAATTAATTGTGAAATACTTCACAATATCGTGCT Larsson JT, et al. (2005): RG DB
Reents H, et al. (2006): RG DB SDM




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai