Regulated gene:sinI

Direction +
Start position 2551722..2551895
Operon sinI-sinR
Transcription start site
COG ID -
Profile antagonist of SinR


Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Exp. Reference Year
AbrB Negative? +24:+46 2551579..2551601 TTTAATGGCAAATGACTTCCAGA
reverse transcriptase extension, FT Shafikhani, S. H., et al. 2002
Hpr Negative -86:-57 2551470..2551499 ATCTGCAAAATAATATTTCAAGCTAACTTT
FT
reverse transcriptase extension, FT
Kallio PT, et al.
Shafikhani, S. H., et al.
1991
2002
Hpr Negative -10:+14 2551544..2551569 TATAATAAAGGTATATTGGAAAAAAA
FT
reverse transcriptase extension, FT
Kallio PT, et al.
Shafikhani, S. H., et al.
1991
2002
SigA ND -53:+7 2551503..2551562 ACCATTCGACATCATTCTCGTTTTTTTTGAGAAAATACGATTATAATA
AAGGTATATTGG
PE,HM Shafikhani SH, et al.
Gaur NK, et al.
1988
2002
SigA ND -41:+5 2551584..2551629 TGGCAAATGACTTCCAGAGACTAATGAAGCATACAATAAGTCAT
GG
PE,HM Gaur NK, et al. 1988
Spo0A Positive -50:-26 2551546..2551569 ACCATTCGACATCATTCTCGTTTTTTTT
reverse transcriptase extension, FT Shafikhani, S. H., et al. 2002







Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2003
Contact: knakai@ims.u-tokyo.ac.jp