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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | degQ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| degQ | sacQ | - | 3256136..3256276 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Yang M, et al. (1986) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| ComA | Positive | -74:-32 | 3256383..3256425 | AGATTTGCGGTGTCACGCAGGACTTTTTTGCATACTTTTCGGT |
Msadek T, et al. (1991): DP DB RG |
| DegU | Positive | -393:-186 | ND | ND |
Msadek T, et al. (1990): DB RG Msadek T, et al. (1991): DP DB RG |
| SigA | Promoter | -48:+20 | 3256332..3256399 | TTTGCATACTTTTCGGTGAAAAATGAGCCGAAAGCAGACACACTATTAGTAACAGATCAAATACCTAG |
Yang M, et al. (1986): S1 |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGACTTGGAAACAAGTCTTTTTTTTCGTTCTA >>>>>> <<<<<< |
degQ |
|