Regulated Operon: hemZ

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
hemZ yhaW, yhaV + 1056989..1058494 coproporphyrinogen III oxidase COG0635  

Operon evidence: Northern blotting (1.6 kb transcript)
Reference: Homuth G, et al. (1999)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
FNR Positive ND ND ND Homuth G, et al. (1999): RG
ResD Positive ND ND ND Homuth G, et al. (1999): RG
SigA Promoter -40:+6 1056918..1056963 CCGGATTGATTTTAGCAGTTTATTTCTGTACACTAAAGAAAGTTTT Homuth G, et al. (1999): PE NB
ArfM Positive ND ND ND Homuth G, et al. (1999): RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
ACAAAGCAGCACTGATTACAGTGCTGCTTTTTTTATCCCTGT
     >>>>>>>>>    <<<<<<<<<
1058485..1058506
-9..12
-17.1
 hemZ

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai