Transcription factor: CcpC

Factor type LysR family
SWISS-PROT O34827
SubtiList BG13297
Consensus seq. ND
Comment carbon catabolite and anaerobic repression of citB and citZ
Link to Phylogenetic profile

Operon Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
ykuJK-ykzF-ykuL-ccpC ccpC SigA Negative 1485309..1485333 -10:+15 GGGAGATAAGAAAAACTTATTGATA Kim HJ, et al. (2002): GS FT
citB citB SigA Negative 1925746..1925769 -75:-52 TCATAAGTCGAACTTATTGTATTT Jourlin-Castelli C, et al. (2000): GS FT
citB citB SigA Negative 1925781..1925799 -35:-22 TGATATTTACTTATGTATG Jourlin-Castelli C, et al. (2000): GS FT
citZ-icd-mdh citZ SigA Negative 2981498..2981513 -11:+5 ATAATGAGAATAGGCT Jourlin-Castelli C, et al. (2000): RG GS FT
Kim HJ, et al. (2002): PE DB RG SDM FT
citZ-icd-mdh citZ SigA Negative 2981459..2981482 +21:+44 TTATAAAAATTTGTTATGTTCTTT Jourlin-Castelli C, et al. (2000): RG GS FT
Kim HJ, et al. (2002): PE DB RG SDM FT




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai