Transcription factor: IolR

Factor type DeoR
SWISS-PROT P46337
SubtiList BG11364
Consensus seq. WRAYCAADARDWRAYCAADARD
Comment a negative regulator (presumably a repressor) which exists immediately upstream of the iol operon in the opposite direction
Link to Phylogenetic profile, Weight matrix, Motif alignment & Similar conserved hexameric motifs

Operon Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
iolRS iolR SigA Negative 4083695..4083746 -94:-43 AGAAGGCCGTCCAATCTTGCAAAAGATATACACCGATGTTATCATTTTTAAG Yoshida KI, et al. (1997): DB DP HB
iolRS iolR SigA Negative 4083749..4083770 -40:-19 ACTATTGATTAACTTTTGGTTT Yoshida KI, et al. (1999): GS FT
ydjK ydjK SigA Negative 675700..675788 -2:+87 TCAGATATAACAAAAATGTCACTATAACATCACTACAATTGAACTATTAAGTGACTAATAAATACCAAATGAACGAGGTTATGCACAAA Yoshida K, et al. (2002): NB PE FT
mmsA-iolBCDEF-idh-iolHI-fbaB mmsA SigA Negative 4083638..4083700 -107:-45 CCTTCTCTTACTTCTCTTACTTGATTAAAAGATTAATATAATAAAAATAATGAAAAAATGTAG Yoshida KI, et al. (1997): DB DP HB
mmsA-iolBCDEF-idh-iolHI-fbaB mmsA SigA Negative 4083577..4083598 -5:+17 TAACCAAGAAATGACCAAAAAG Yoshida KI, et al. (1999): GS FT



Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai