 |
Copyright: Human Genome Center, Inst. Med.
Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Factor type | ND |
|---|---|
| SWISS-PROT | P24219 |
| SubtiList | BG10748 |
| Consensus seq. | TGGCACN(5)TTGCA |
| Comment | RNA polymerase Sigma-54 factor (Sigma L) |
| Link to | Phylogenetic profile, Weight matrix, Motif alignment & Similar conserved hexameric motifs |
| Operon | Regulated Gene | Absolute position | Location | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| acoABCL | acoA | 878275..878314 | -34:+6 | AAAAGACTGGCACACTTCTTGCATTTATAATGGTGAACCC |
Ali NO, et al. (2001): PE HM |
| levDEFG-sacC | levD | 2762083..2762122 | -35:+5 | ACTGTGTTGGCACGATCCTTGCATTATATATGGATGTACA |
Martin I, et al. (1989): PE Debarbouille M, et al. (1991): DB RG |
| ptb-bcd-buk-lpdV-bkdAABB | ptb | 2503877..2503918 | -34:+8 | TAAGAGCTGGCATGGAACTTGCATAATAAAAGGCGGAGTCGA |
Debarbouille M, et al. (1999): PE |
| rocABC | rocA | 3879568..3879607 | -35:+5 | AAGAAAATGGCATGATTCTTGCATTTTTATTCATATGCGA |
Calogero S, et al. (1994): PE |
| rocDEF | rocD | 4144573..4144612 | -35:+5 | CTTGATTTGGCACAGAACTTGCATTTATATAAAGGGAAAG |
Gardan R, et al. (1995): PE |
| rocG | rocG | 3881116..3881157 | -34:+8 | CAAAAGCTGGTACGGATCTTGCATGATGATAAGGGTGAATCC |
Belitsky BR & Sonenshein AL (1999): PE |
|