 |
Copyright: Human Genome Center, Inst. Med.
Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Factor type | ND |
|---|---|
| SWISS-PROT | ND |
| SubtiList | ND |
| Consensus seq. | TGGCACN(5)TTGCA |
| Comment | RNA polymerase Sigma-54 factor (Sigma L) |
| Link to | Phylogenetic profile, Weight matrix & Motif alignment |
| Operon | Regulated Gene | Absolute position | Location | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| acoABCL | acoA | 878940..878979 | -34:+6 | AAAAGACTGGCACACTTCTTGCATTTATAATGGTGAACCC |
Ali NO, et al. (2001): PE HM |
| levDEFG-sacC | levD | 2762858..2762897 | -35:+5 | ACTGTGTTGGCACGATCCTTGCATTATATATGGATGTACA |
Martin I, et al. (1989): PE Debarbouille M, et al. (1991): DB RG |
| ptb-bcd-buk-lpdV-bkdAABB | ptb | 2504685..2504726 | -34:+8 | TAAGAGCTGGCATGGAACTTGCATAATAAAAGGCGGAGTCGA |
Debarbouille M, et al. (1999): PE |
| rocABC | rocA | 3880546..3880585 | -35:+5 | AAGAAAATGGCATGATTCTTGCATTTTTATTCATATGCGA |
Calogero S, et al. (1994): PE |
| rocDEF | rocD | 4145549..4145588 | -35:+5 | CTTGATTTGGCACAGAACTTGCATTTATATAAAGGGAAAG |
Gardan R, et al. (1995): PE |
| rocG | rocG | 3882094..3882135 | -34:+8 | CAAAAGCTGGTACGGATCTTGCATGATGATAAGGGTGAATCC |
Belitsky BR & Sonenshein AL (1999): PE |
|