| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| cwlC | N-acetylmuramoyl-L-alanine amidase | 1 | 1 | |
| cwlD-Pg | N-acetylmuramoyl-L-alanine amidase | 2 | 2 | |
| cwlJ | 1 | 1 | ||
| dacB | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*) | 1 | 1 | |
| dacF | D-alanyl-D-alanine carboxypeptidase (penicilin binding protein) | 3 | 2 | |
| dinC | 1 | 2 | ||
| dltA | D-alanyl-D-alanine carrier protein ligase (Dcl) | 3 | 3 | |
| gtaB | UTP-glucose-1-phosphate uridylyltransferase | 1 | 1 | |
| lytD | 1 | 2 | ||
| cwlF-Ph | cwlF, papQ | 1 | 1 | |
| lytF | cwlE, yhdD | 1 | 1 | |
| pbpD | penicillin-binding protein 4 | 1 | 1 | |
| pbpE | penicillin-binding protein 4* | 3 | 4 | |
| pbpF | penicillin-binding protein 1A | 1 | 1 | |
| spoVD | penicillin-binding protein | 3 | 3 | |
| wapA | cell wall-associated protein precursor (CWBP200, 105, 62) | 1 | 1 | |
| yojL | similar to cell wall-binding protein | 1 | 1 | |
| yqeE | cwlH | similar to N-acetylmuramoyl-L-alanine amidase | 1 | 2 |
| yrvJ | similar to N-acetylmuramoyl-L-alanine amidase | 1 | 1 | |
| ywhE | 2 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| appA | oligopeptide ABC transporter (oligopeptide-binding protein) | 1 | 0 | |
| bglP | phosphotransferase system (PTS) beta-glucoside-specific enzyme IIABC component | 1 | 2 | |
| feuA | iron-binding protein | 2 | 2 | |
| fhuD | ferrichrome ABC transporter (ferrichrome-binding protein) | 2 | 2 | |
| glpFK | glycerol uptake facilitator | 2 | 2 | |
| glpTQ | glycerol-3-phosphate permease | 2 | 1 | |
| mntA | ytgA | similar to ABC transporter (membrane protein) | 1 | 2 |
| narK | nitrite extrusion protein | 1 | 1 | |
| nrgA | ammonium transporter | 2 | 3 | |
| oppA | oligopeptide ABC transporter (binding protein) | 1 | 0 | |
| ptsX | crr, ptsX | 2 | 1 | |
| pyr | uracil permease | 1 | 4 | |
| sacP | phosphotransferase system (PTS) sucrose-specific enzyme IIBC component | 1 | 1 | |
| ycdH | similar to adhesion protein | 1 | 1 | |
| ydhL | similar to chloramphenicol resistance protein | 1 | 0 | |
| yvrP | similar to hypothetical proteins from B. subtilis | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| degSU | two-component sensor histidine kinase | 1 | 1 | |
| kinA | two-component sensor histidine kinase | 2 | 1 | |
| kinB | two-component sensor histidine kinase | 1 | 1 | |
| kinC | two-component sensor histidine kinase | 4 | 3 | |
| ybdK | similar to two-component sensor histidine kinase [YbdJ] | 1 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| ccdA | integral membrane protein | 1 | 1 | |
| ctaA | heme-containing membrane protein | 2 | 2 | |
| ctaB | cytochrome caa3 oxydase assembly factor | 1 | 0 | |
| hmp | flavohemoglobin | 1 | 1 | |
| lctE | L-lactate dehydrogenase | 3 | 3 | |
| narG | nitrate reductase (alpha subunit) | 1 | 1 | |
| nfrA | ywcG | alternate gene name: ipa-43d~similar to NADPH-flavin oxidoreductase | 1 | 1 |
| qcrA | bfcA, petC | 1 | 0 | |
| resA | ypxA | essential protein similar to cytochrome c biogenesis protein | 2 | 1 |
| ydbP | similar to thioredoxin | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| cheV | cheV | 1 | 1 | |
| flgB | 1 | 1 | ||
| flaAorf3 | fliH | 1 | 1 | |
| flaAorf7 | fliK | 1 | 1 | |
| flaAorf10-2 | fliL | 1 | 2 | |
| hag | flagellin protein | 2 | 1 | |
| mcpA | 1 | 1 | ||
| mcpB | 1 | 1 | ||
| mcpC | 1 | 1 | ||
| motA | mot | 1 | 1 | |
| fliD | yvyC | flagellar hook-associated protein 2 (HAP2) | 1 | 1 |
| yvyF | alternate gene name: yviB~similar to flagellar protein | 2 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| lytA | lppX | 3 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| divIB | cell-division initiation protein | 1 | 1 | |
| divIC | cell-division initiation protein | 2 | 2 | |
| ftsA | cell-division protein | 5 | 5 | |
| minC | 1 | 1 | ||
| yjoB | similar to cell-division protein FtsH homolog | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| bofA | integral membrane protein | 3 | 3 | |
| bofC | bofC | 3 | 2 | |
| cgeA | alternate gene name: cgeAB | 1 | 6 | |
| cgeC | alternate gene name: cgeBA | 1 | 2 | |
| cotA | spore coat protein (outer) | 1 | 1 | |
| cotB | spore coat protein (outer) | 1 | 3 | |
| cotC | spore coat protein (outer) | 1 | 4 | |
| cotD | spore coat protein (inner) | 1 | 6 | |
| cotE-P2 | morphogenic protein | 2 | 3 | |
| cotF | spore coat protein | 1 | 1 | |
| cotG | morphogenetic protein | 1 | 2 | |
| cotH | ywrH | 2 | 2 | |
| cotJ | cotJA | 1 | 1 | |
| sspO | cotK | 1 | 1 | |
| cotM | spore coat protein (outer) | 1 | 1 | |
| cotS | spore coat protein | 1 | 1 | |
| cotT | spore coat protein (inner) | 1 | 1 | |
| cotV | spore coat protein (insoluble fraction) | 1 | 2 | |
| cotX | spore coat protein (insoluble fraction) | 1 | 4 | |
| cotY | spore coat protein (insoluble fraction) | 1 | 3 | |
| csgAA | sporulation-specific SASP protein | 2 | 1 | |
| phrC-P2 | regulator of the activity of phosphatase RapC and competence and sporulation stimulating factor (CSF) | 1 | 1 | |
| phrEP3 | phrE | regulator of the activity of phosphatase RapE | 1 | 2 |
| phrF | regulator of the activity of phosphatase RapF | 1 | 1 | |
| phrG | regulator of the activity of phosphatase RapG | 1 | 1 | |
| phrIP2 | phrI | regulator of the activity of phosphatase RapI | 1 | 1 |
| phrK | regulator of the activity of phosphatase RapK | 1 | 1 | |
| rapC | response regulator aspartate phosphatase | 1 | 1 | |
| rapD | response regulator aspartate phosphatase | 1 | 1 | |
| rapE | response regulator aspartate phosphatase | 1 | 0 | |
| rapH | response regulator aspartate phosphatase | 1 | 2 | |
| rsfA | ywfN | 2 | 0 | |
| sinI | antagonist of SinR | 6 | 7 | |
| spoIIG | protease | 1 | 1 | |
| spoIIIA | spoIIIAA | 1 | 1 | |
| spoIIM | spoIIM | 1 | 1 | |
| spoIIP | spoIIP | 1 | 1 | |
| spoIIQ | alternate gene name: ywnI | 1 | 0 | |
| spoIIR | alternate gene name: ipc-27d, csfX | 1 | 1 | |
| spoIVA-P2 | spoIVA | alternate gene name: spoVP | 1 | 2 |
| spoIVB | spoIVB | 3 | 2 | |
| spoIVCA | site-specific DNA recombinase | 3 | 3 | |
| spoIVFA | inhibitor of SpoIVFB | 2 | 2 | |
| spoVA | mutants lead to the production of immature spores (stage V sporulation) | 2 | 1 | |
| spoVB | alternate gene name: spoIIIF | 1 | 1 | |
| spoVE-P1 | 1 | 2 | ||
| spoVFA | dipicolinate synthase subunit A | 1 | 1 | |
| spoVG-P2 | spoVG | 4 | 4 | |
| spoVID | spoVID | 1 | 1 | |
| spoVK-P2 | alternate gene name: spoVJ~disruption leads to the production of immature spores (stage V sporulation) | 2 | 2 | |
| spoVM | spoVM | 1 | 1 | |
| spoVR | spoVR | 1 | 1 | |
| spoVS | 1 | 1 | ||
| yaaH | similar to hypothetical proteins | 1 | 1 | |
| yabG | yabG | 1 | 1 | |
| yobW | csk22 | alternate gene name: csk22~similar to sporulation membrane protein sigma-K-controlled | 1 | 1 |
| safA | yrbA | similar to spore coat protein | 1 | 1 |
| sspI-P2 | ysfA | 1 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| gerA | gerAA | 3 | 2 | |
| gerB | gerBA | 2 | 1 | |
| gerD | gerD | 2 | 1 | |
| gerM | gerM | 1 | 1 | |
| gpr | spore protease | 3 | 2 | |
| sleB | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| comG | late competence gene | 1 | 1 | |
| mecA | mecA | 2 | 2 | |
| med | alternate gene name: yjaW | 1 | 1 | |
| smf | DNA processing Smf protein homolog | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| ackA | acetate kinase | 1 | 2 | |
| acoA | acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) | 3 | 3 | |
| acsA | acetyl-CoA synthetase | 2 | 2 | |
| acuA | acetoin dehydrogenase | 2 | 2 | |
| aldY | aldehyde dehydrogenase | 1 | 1 | |
| alsS | alpha-acetolactate synthase (pH6) | 2 | 2 | |
| amyE | alpha-amylase | 1 | 1 | |
| araA | L-arabinose isomerase | 2 | 3 | |
| araB | L-ribulokinase | 1 | 1 | |
| bglS | licS, bgl | 1 | 1 | |
| gdh | glucose 1-dehydrogenase | 1 | 0 | |
| glgB | 1,4-alpha-glucan branching enzyme | 1 | 1 | |
| glpD | glycerol-3-phosphate dehydrogenase | 2 | 1 | |
| gutB | sorbitol dehydrogenase | 2 | 3 | |
| iolB | alternate gene name: yxdB~myo-inositol catabolism | 1 | 1 | |
| kdgA | deoxyphosphogluconate aldolase | 1 | 1 | |
| lacA | beta-galactosidase | 1 | 0 | |
| malA | glvA | 6-phospho-alpha-glucosidase | 1 | 1 |
| pta | phosphotransacetylase | 1 | 3 | |
| sacB | levansucrase | 2 | 3 | |
| sacX | negative regulatory protein of SacY | 2 | 5 | |
| xylA | xylose isomerase | 1 | 2 | |
| ybaN | alternate gene name: ybxG~similar to polysaccharide deacetylase | 1 | 1 | |
| yhdF | similar to glucose 1-dehydrogenase | 1 | 1 | |
| yjmA | similar to glucuronate isomerase | 1 | 1 | |
| yoaJ | yoaJ | 1 | 1 | |
| yrhH | similar to methyltransferase | 2 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| citA | citrate synthase I | 2 | 1 | |
| citB | aconitate hydratase | 8 | 5 | |
| citC | isocitrate dehydrogenase | 1 | 1 | |
| citG-P2 | citG | fumarate hydratase | 1 | 1 |
| odhA | 2-oxoglutarate dehydrogenase (E1 subunit) | 1 | 1 | |
| sdhA | succinate dehydrogenase (flavoprotein subunit) | 1 | 1 | |
| ssd | yjmC | 1 | 2 | |
| ywkA | maeA | similar to malate dehydrogenase | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| ald | similar to formaldehyde dehydrogenase | 1 | 1 | |
| ansA | L-asparaginase | 2 | 1 | |
| aprE | serine alkaline protease (subtilisin E) | 11 | 9 | |
| argC | N-acetylglutamate gamma-semialdehyde dehydrogenase | 2 | 4 | |
| asd | aspartate-semialdehyde dehydrogenase | 1 | 1 | |
| epr | extracellular serine protease | 1 | 1 | |
| gltA | glutamate synthase (large subunit) | 2 | 6 | |
| ilvB | acetolactate synthase (acetohydroxy-acid synthase) (large subunit) | 1 | 1 | |
| ilvC | ketol-acid reductoisomerase (acetohydroxy-acid isomeroreductase) | 1 | 1 | |
| lysC | aspartokinase II alpha subunit (aa 1->408) and beta subunit (aa 246->408) | 1 | 1 | |
| mmsA | iolA | methylmalonate-semialdehyde dehydrogenase | 1 | 3 |
| nasB | assimilatory nitrate reductase (electron transfer subunit) | 2 | 3 | |
| nasD | assimilatory nitrite reductase (subunit) | 2 | 1 | |
| nasE | assimilatory nitrite reductase (subunit) | 1 | 1 | |
| nprE | extracellular neutral metalloprotease | 4 | 2 | |
| rocA | pyrroline-5 carboxylate dehydrogenase | 1 | 6 | |
| rocD | ornithine aminotransferase | 1 | 4 | |
| vpr | extracellular serine protease | 1 | 1 | |
| yisK | similar to 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxylase | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| cdd | cytidine/deoxycytidine deaminase | 1 | 1 | |
| dra | deoxyribose-phosphate aldolase | 1 | 2 | |
| guaA | GMP synthetase | 1 | 1 | |
| guaD | gde, yknA | similar to hypothetical proteins | 1 | 1 |
| hipO | hippurate hydrolase | 1 | 1 | |
| nucA | nuclease | 1 | 1 | |
| nucB | nuclease | 1 | 1 | |
| pucA | yurF | 1 | 0 | |
| pucH | yunH | 1 | 1 | |
| purA | adenylosuccinate synthetase | 2 | 4 | |
| purE | phosphoribosylaminoimidazole carboxylase I | 1 | 1 | |
| purF | phosphoribosylpyrophosphate amidotransferase | 1 | 1 | |
| pyrC | dihydroorotase | 1 | 1 | |
| relA | GTP pyrophosphokinase | 1 | 1 | |
| xpt | xanthine phosphoribosyltransferase | 1 | 2 | |
| yabJ | similar to hypothetical proteins | 1 | 1 | |
| yhcR | similar to 5'-nucleotidase | 1 | 1 | |
| ywaC | alternate gene name: ipa-7d~similar to GTP-pyrophosphokinase | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| glpQ | glycerophosphoryl diester phosphodiesterase | 2 | 2 | |
| lcfA | long chain acyl-CoA synthetase | 1 | 1 | |
| mmgA | acetyl-CoA acetyltransferase | 2 | 2 | |
| pssA | pss | 1 | 1 | |
| ptb | yqiS | similar to phosphate butyryltransferase | 2 | 2 |
| yhaR | similar to 3-hydroxbutyryl-CoA dehydratase | 2 | 2 | |
| yngJ | similar to butyryl-CoA dehydrogenase | 1 | 1 | |
| des | yocE | similar to fatty-acid desaturase | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| bioW | 6-carboxyhexanoate-CoA ligase | 1 | 1 | |
| dhbA | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | 2 | 2 | |
| hemA | glutamyl-tRNA reductase | 2 | 3 | |
| menB | dihydroxynapthoic acid synthetase | 1 | 1 | |
| menE | O-succinylbenzoic acid-CoA ligase | 1 | 1 | |
| nadB | L-aspartate oxidase | 1 | 1 | |
| nifS | nifS | 1 | 1 | |
| ribG | riboflavin-specific deaminase | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| phoA | alkaline phosphatase A | 2 | 2 | |
| phoB-Ps | 3 | 3 | ||
| phoD | phosphodiesterase/alkaline phosphatase D | 1 | 1 | |
| xpaC | xpaC | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| dnaA | alternate gene name: dnaH, dnaJ, dnaK | 1 | 1 | |
| dnaEP2 | DNA polymerase III (alpha subunit) | 1 | 1 | |
| ywpH | similar to single-strand DNA-binding protein | 1 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| adaA | methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) | 2 | 1 | |
| alkA | DNA-3-methyladenine glycosylase | 2 | 1 | |
| dinB | nuclease inhibitor | 1 | 1 | |
| yisT | alternate gene name: yucH~similar to nuclease inhibitor | 1 | 1 | |
| yqfS | similar to endonuclease IV | 1 | 1 | |
| ysxA | similar to DNA repair protein | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| addA | ATP-dependent deoxyribonuclease (subunit A) | 2 | 2 | |
| recA | multifunctional SOS repair regulator | 4 | 5 | |
| sbcD | exonuclease SbcD homolog | 1 | 0 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| gyrB | DNA gyrase (subunit B) | 1 | 1 | |
| hbs | non-specific DNA-binding protein HBsu | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| flaB | 2 | 2 | ||
| rpoD-P3 | rpoD | 1 | 2 | |
| sigB | RNA polymerase sigma-37 factor (sigma-B) | 2 | 2 | |
| sigD | RNA polymerase sigma-28 factor (sigma-D) | 1 | 1 | |
| spoIIIG | sigG | 2 | 1 | |
| sigM | yhdM | 1 | 1 | |
| sigW | RNA polymerase ECF-type sigma factor (sigma-W) | 2 | 2 | |
| sigX | ypuM | RNA polymerase ECF-type sigma factor (sigma-X) | 1 | 1 |
| sigY | RNA polymerase ECF-type sigma factor (sigma-Y) | 1 | 1 | |
| spoIIIG | 1 | 1 | ||
| spoIVCB | sigK | RNA polymerase sporulation-specific sigma factor (sigma-K) (N-terminal half) | 2 | 10 |
| yvyD-P2 | yvyD | alternate gene name: yviI~similar to ribosomal protein S30AE family | 2 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| abh | transcriptional regulator | 2 | 2 | |
| abrB | transcriptional regulator | 5 | 4 | |
| acoR | transcriptional regulator | 2 | 1 | |
| araR | transcriptional regulator (LacI family) | 1 | 1 | |
| azlB | transcriptional regulator (Lrp/AsnC family) | 1 | 0 | |
| ccpC-P2 | ccpC | 1 | 2 | |
| comK | competence transcription factor (CTF) | 9 | 6 | |
| comQ | transcriptional regulator | 1 | 1 | |
| cssR | 1 | 1 | ||
| degU | two-component response regulator | 1 | 1 | |
| dinR | 1 | 3 | ||
| fnr | transcriptional regulator (FNR/CRP family) | 1 | 1 | |
| fruR | transcriptional regulator (DeoR family) | 1 | 0 | |
| gerE | transcriptional regulator | 1 | 1 | |
| glnR | transcriptional regulator | 2 | 5 | |
| glpP | transcription antiterminator | 1 | 0 | |
| gntR | transcriptional regulator (GntR family) | 2 | 2 | |
| hpr | transcriptional regulator | 1 | 0 | |
| hutP | transcriptional regulator | 5 | 5 | |
| iolR | transcriptional regulator (DeoR family) | 1 | 2 | |
| kdgR | transcriptional regulator (LacI family) | 1 | 0 | |
| lrpC | transcriptional regulator (Lrp/AsnC family) | 1 | 1 | |
| lytR | membrane-bound protein | 2 | 1 | |
| mta | transcriptional regulator | 1 | 1 | |
| paiB | transcriptional regulator | 1 | 1 | |
| perR | 1 | 2 | ||
| phoP | two-component response regulator | 2 | 0 | |
| purR | transcriptional regulator | 1 | 3 | |
| rbsR | transcriptional regulator (LacI family) | 2 | 3 | |
| resD | two-component response regulator | 1 | 1 | |
| senS | transcriptional regulator | 1 | 1 | |
| splA | transcriptional regulator | 1 | 1 | |
| spo0A | two-component response regulator | 7 | 6 | |
| spoIIID | transcriptional regulator | 1 | 1 | |
| spoVT | transcriptional regulator | 2 | 1 | |
| xylR | transcriptional regulator | 1 | 1 | |
| ybbB | alternate gene name: yzbC~similar to transcriptional regulator (AraC/XylS family) | 2 | 2 | |
| ycbL | similar to two-component response regulator [YcbM] | 1 | 1 | |
| ywiD | arfM | ywiD | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| nusA | nusA | 1 | 1 | |
| yqhZ | similar to transcription termination | 2 | 3 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| rncS | ribonuclease III | 1 | 0 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| dciA-A | dipeptide ABC transporter | 3 | 3 | |
| ppiB | peptidyl-prolyl isomerase | 1 | 1 | |
| prkA | serine protein kinase | 1 | 1 | |
| ynaD | similar to hypothetical proteins | 1 | 1 | |
| yteI | similar to protease IV | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| dnaK | class I heat-shock protein (chaperonin) | 2 | 2 | |
| groE | class I heat-shock protein (molecular chaperonin) | 2 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| bsaA | glutathione peroxidase | 1 | 1 | |
| csbB | stress response protein | 1 | 1 | |
| cspB | major cold-shock protein | 2 | 2 | |
| ctc | general stress protein | 1 | 2 | |
| degQ | alternate gene name: sacQ | 2 | 3 | |
| degR | alternate gene name: prtR | 2 | 2 | |
| dps | alternate gene name: ytkB~stress- and starvation-induced gene controlled by sigma-B | 1 | 1 | |
| gsiB | general stress protein | 3 | 2 | |
| gspA | general stress protein | 1 | 2 | |
| htrA | ykdA | serine protease Do (heat-shock protein) | 1 | 0 |
| mrgA | metalloregulation DNA-binding stress protein | 1 | 1 | |
| ydjF | similar to hypothetical proteins | 1 | 2 | |
| yqhA | similar to hypothetical proteins | 1 | 1 | |
| ytxG-P2 | ytxG | alternate gene name: csb40~similar to general stress protein | 2 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| ahpC | alkyl hydroperoxide reductase (small subunit) | 1 | 1 | |
| bmrU | multidrug resistance protein | 1 | 1 | |
| katA | vegetative catalase 1 | 1 | 1 | |
| katE | 1 | 1 | ||
| katX | catalase | 1 | 1 | |
| ybfO | similar to erythromycin esterase | 1 | 1 | |
| yceC | similar to tellurium resistance protein | 1 | 1 | |
| ydhU | ydhU | 1 | 1 | |
| yndN | fosB | similar to fosfomycin resistance protein | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| sboA | subtilosin A | 2 | 0 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| xkdB | alternate gene name: ykxB~PBSX prophage | 1 | 4 | |
| xtmA | PBSX defective prophage terminase (small subunit) | 1 | 0 | |
| ymaH | similar to host factor-1 protein | 1 | 1 | |
| yobO | similar to phage-related pre-neck appendage protein | 2 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| yneB | similar to resolvase | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| csbA | putative membrane protein | 1 | 1 | |
| yyaF | similar to hypothetical proteins | 1 | 2 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| ybaK | 1 | 1 | ||
| ydbS | ydbS | 1 | 1 | |
| ydcC | ydcC | 1 | 1 | |
| yhcN | 2 | 2 | ||
| yjbC | yjbC | 6 | 5 | |
| yjbF | yjbF | 1 | 1 | |
| ylbJ | ylbJ | 1 | 1 | |
| yoeA | similar to hypothetical proteins from B. subtilis | 1 | 1 | |
| yoxA | similar to hypothetical proteins from B. subtilis | 1 | 1 | |
| yozO | yozO | 1 | 1 | |
| ypiB | ypiB | 1 | 1 | |
| ypjB | ypjB | 1 | 1 | |
| yqeZ | yqeZ | 1 | 1 | |
| yqfC | yqfC | 1 | 1 | |
| yqfZ | yqfZ | 1 | 1 | |
| yqhQ | yqhQ | 1 | 1 | |
| yrvD | yrvD | 1 | 1 | |
| ysdB | ysdB | 2 | 2 | |
| yttP | yttP | 1 | 1 | |
| ytxC | ytxC | 1 | 1 | |
| ywzA | similar to hypothetical proteins from B. subtilis | 1 | 1 | |
| yxiC | similar to hypothetical proteins from B. subtilis | 1 | 1 | |
| yxjC | similar to hypothetical proteins from B. subtilis | 1 | 1 | |
| yyaD | similar to hypothetical proteins from B. subtilis | 1 | 1 |
| Promoter | Synonym | Description | Num. of Regulatory elements |
Num. of Sequences in Alignmnent |
|---|---|---|---|---|
| yacL | similar to hypothetical proteins | 1 | 1 | |
| ydcA | similar to hypothetical proteins | 1 | 1 | |
| ydfK | similar to hypothetical proteins | 1 | 0 | |
| yhaX | similar to hypothetical proteins | 1 | 1 | |
| yhbH | alternate gene name: yzdC~similar to hypothetical proteins | 1 | 1 | |
| yoaG | similar to hypothetical proteins | 1 | 1 | |
| yqxL | alternate gene name: yqhC~similar to hypothetical proteins | 1 | 1 | |
| ytiP2 | ytiP | similar to hypothetical proteins | 1 | 2 |
| ytkL | similar to hypothetical proteins | 1 | 1 | |
| ytvI | similar to hypothetical proteins | 1 | 1 | |
| ywbL | alternate gene name: ipa-27d~similar to hypothetical proteins | 1 | 1 | |
| ywbN | alternate gene name: ipa-29d~similar to hypothetical proteins | 2 | 2 | |
| ywfI | alternate gene name: ipa-87r~similar to hypothetical proteins | 1 | 1 | |
| yxkO | similar to hypothetical proteins | 1 | 1 |