| Ranka | Geneb
| Positionc
| Sequenced
| Binding factore
| Speciesf
| Functional classificationg
| |
|---|---|---|---|---|---|---|
|
#1 |
(pckA) (metK) ykrW yusC |
-246 : -183 -258 : -291 -105 : -159 -165 : -182 |
_CGGTTGCTGGGCTTCATAGGGC.. __GGTTGCTGGGCTTCATAGGGC.. ..GGTTGCCGGGCTTCATCGGGC.. __GGTTGCCGGGCTTCATAG |
|
S H S S H |
main glycolytic pathways metabolism of amino acids and related molecules specific pathways transport/binding proteins and lipoproteins |
|
#2 |
alaS ileS leuS ilvB tyrZ tyrS valS proB pheS hisS serS glyQ thrS |
-113 : -97 -89 : -73 -150 : -135 -161 : -143 -77 : -62 -88 : -69 -98 : -80 -87 : -72 -106 : -89 -128 : -103 -88 : -73 -122 : -101 -91 : -71 |
______AGGGTGGTACCGCGAG-A ______AGGGTGGTACCGCGAGA ______AGGGTGGTACCGCGGG ______AGGGTGGTACCGCGGAAAG ______AGGGTGGTACCGCGTG _TTAGTAGGGTGGTACCGCGA __AAAAAAGGTGGTACCGCGA ______AAGGTGGTACCACGGA __AATAAGGGTGGTACCGCG __AACTAGGGTGGCACCACGGGT.. ______AGGGTGGCAACGCGAG GCAACTAGGGTGGAACCGCGGG GAAAAAAGGGTGGAACCACGA |
|
H S H S H S H S H S H S H S H H S H S H H S |
aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases metabolism of amino acids and related molecules aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases metabolism of amino acids and related molecules aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases |
|
#3 |
serS leuS alaS glyQ ileS hisS thrS pheS |
-71 : -58 -123 : -111 -95 : -83 -98 : -83 -68 : -56 -102 : -93 -55 : -45 -80 : -70 |
_GCTCTCGTCCCTTT __CTCTCGTCCCTTT AGCTCTCGTCCCT AACTCTCGTCCCTATG CTTTCTCGTCCCT ___TCTCGTCCCT ____CTCGTCCCTTT _____TCGTCCCTTGT |
|
H S H S H S H H S H S H S H |
aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases |
|
#4 |
arsR arsR rsfA |
-37 : -10 -98 : -75 -159 : -146 |
_ATACATCAAAAAAAATTGATTAA.. AATTAATCAAAATAAATTGATTTA ____TTTCAAAAAAAATC |
|
H H H |
regulation regulation Sporulation |
|
#5 |
ykrW ykrT (yjcH) (yjcI) yitJ metE |
-101 : -78 -132 : -113 -245 : -261 -111 : -95 -137 : -118 -166 : -155 |
_AAGCACGGTGCTAATTCTTGCAGC AAGGCACGGTGCTAATTCCA _______GGTGCTAAATCCAGC-AA _______GGTGCTAAATCCAGC-AA _GACCAAGGTGCTAAATCCAG ______CGGTGCTAATTC |
|
S S S H S S H |
specific pathways none none metabolism of amino acids and related molecules none metabolism of amino acids and related molecules |
|
#6 |
ctsR clpE dnaJ clpE clpE |
-37 : -18 -159 : -143 -126 : -108 -90 : -76 -209 : -194 |
_GTCAAATATAGTCAAAGTCA GGTCAAAGATAGTCAAA _______GAAAGTCAAAGTCAGGCAT ____ACTAATAGTCAAAGA ____ACTATTAATCAAAGTT |
CtsR CtsR CtsR CtsR |
H S H S H H |
regulation adaptation to atypical conditions adaptation to atypical conditions adaptation to atypical conditions adaptation to atypical conditions |
|
#7 |
citZ rpoE yqeG pnbA |
-215 : -190 -105 : -90 -179 : -172 -32 : -24 |
ATTATTGTTTATAATGAGAATAGGCT _ATTTTGTTTATAATGA _____TGTTTATA ______GTTTATAAT |
SigA |
H H S H S H S |
TCA cycle elongation none antibiotic production |
|
#8 |
spoIIAA ywkC abrB |
-82 : -69 -71 : -61 -284 : -275 |
CCACTAGTTTTGTC ___CTTGTTTTGTC ____GAATTTTGTC |
SinR |
H S H S H S |
sporulation none regulation |
|
#9 |
spoIIQ yjcI yitJ rpsJ |
-30 : -5 -137 : -154 -159 : -169 -98 : -58 |
..AATG-TTGCTGAGGTGATGA __GCCGGTTGCTGAGGTTTC _____GGTTGCTGAAG ____AGGTTGCTGACACACC.. |
|
H S H S S H |
sporulation metabolism of amino acids and related molecules none ribosomal proteins |
|
#10 |
glyQ hisS ynaB |
-68 : -47 -77 : -61 -36 : -17 |
GCATAGAGACGGGAGTTTTTTG ____AGGGGCGGGAGTTTTTT AATGACTATAAAGAGTTTTT |
|
H H H |
aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases none |
|
#11 |
yitJ (yjcH) (yjcI) ykrT ykrW metK |
-105 : -88 -275 : -290 -76 : -63 -101 : -87 -72 : -59 -175 : -168 |
GCTTGGAAGATAAGAAGA __TTGGAAGATAAGAAGA _______AGATAAGAAGAAGC T-CTGAGAGATAAGAG _GCTGAGAGATAAGA ________GATAAGAG |
|
S S H S S S H S |
none none metabolism of amino acids and related molecules none specific pathways metabolism of amino acids and related molecules |
|
#12 |
gapB pckA speD |
-67 : -47 -60 : -46 -155 : -125 |
_TTAATGTGTTATACTAATTTT __ATATATGTTATACTA TTAAACACAGTATACTATTTTTC.. |
|
H H S H |
main glycolytic pathways main glycolytic pathways metabolism of amino acids and related molecules |
|
#13 |
(ydiL) (groES) hrcA hrcA |
-190 : -170 -7 : -27 -23 : -9 -32 : -46 |
CTAAAGAGTGCTAACACAATT CTAAAGAGTGCTAACACAATT _____GAGTGCTAACAGAGG ____CGAGTGCTAATTCTA |
HrcA HrcA HrcA |
H H H S H S |
none protein folding regulation, [the first gene of dnaK operon] regulation, [the first gene of dnaK operon] |
|
#14 |
pbuG xpt |
-188 : -153 -144 : -128 |
___AGTCTCTACCAAGCTACCGTA.. GCAAGTTTCTACCGGGC |
|
H S H S |
transport/binding proteins and metabolism of nucleotides and |
|
#15 |
topA spoIIE accD (ylbN) (ylbM) ypjD ywnA ysiA |
-181 : -170 -72 : -61 -192 : -172 -59 : -52 -151 : -158 -50 : -58 -52 : -40 -86 : -70 |
______GTTTGACAAACG ______TTTTGACAAAAT GACAGCGTTTGACAAAAAAAG ________TTGACAAA ________TTGACAAA _______TTTGACAAA ________TTGACAAACGAAT _AATAAACTTGACAAACC |
Spo0A,SigA |
H S H S S H S H S H S H S |
DNA packaging and segregation, sporulation, [ functionally related to topA] metabolism of lipids none none none none regulation |
|
#16 |
yqeG dnaA yvyD spo0A (yqgX) (yqgW) |
-96 : -80 -144 : -129 -95 : -110 -183 : -191 -89 : -82 -69 : -76 |
_____TTTGTCGAAATTTTTTT ___AATTTGTCGAAAAGCT TGAACTTTGTCGAATT _____TTTGTCGAA _____TTTGTCGA _____TTTGTCGA |
Spo0A |
H S S H H S H S H S |
none, [ clustered together with dnaA in #24 ] DNA replication, [ clustered together with yqeG in #24 ] initiation regulation none none |
|
#17 |
treP treP |
-43 : -20 -60 : -81 |
AGTTGTATATACAAGTTATAAAAA TCCTGTATATAC-AGGTAGTCAA |
TreR TreR |
H H |
transport/binding proteins and lipoproteins transport/binding proteins and lipoproteins |
|
#18 |
ypjA ypjA ytcG |
-89 : -78 -95 : -104 -182 : -171 |
_GTCAGCTTTTTT _GTCAGCTTTT TGTCAGCTTTTT |
|
H S H S H |
none none none |
|
#19 |
trpS spoIID pbuG pyrG |
-40 : -28 -159 : -148 -62 : -51 -118 : -102 |
____CCTTTTTTATTAT ____GGTTTTTTATTT ____CGTTTTTTATTT GGAGC-TTTCTTATTTTC |
|
H S H S S |
aminoacyl-tRNA synthetases sporulation transport/binding proteins and lipoproteins metabolism of nucleotides and nucleic acids |
|
#20 |
purE xpt |
-226 : -184 -172 : -158 |
ACCTCATATAATCTTGGGAATA.. CACTCATATAATCGC |
|
H H S |
metabolism of nucleotides and nucleic acids metabolism of nucleotides and nucleic acids |
|
#21 |
pnpA pnpA asnS |
-157 : -167 -154 : -142 -122 : -108 |
___CTCCCGCTTTT ___TTCCCGCTTTTTT GAAAAGCCGCTTTTT |
|
H S H S S |
metabolism of nucleotides and nucleic acids metabolism of nucleotides and nucleic acids aminoacyl-tRNA synthetases |
|
#22 |
ykvJ nadB yqxD |
-153 : -134 -80 : -65 -80 : -64 |
_CCCTCTATAAAAAACTAAGG _____CCATAAAAAACTCTTG TATTATAATAAAAAATT |
SigA |
H S H H |
none metabolism of coenzymes and prosthetic groups none |
|
#23 |
sigG lonB |
-50 : -38 -62 : -53 |
CCAAGGAGATACT ____GGAGATACTA |
SigG |
H S H S |
initiation adaptation to atypical conditions |
|
#24 |
dnaN yqeG yqeG dnaN dnaA yqeG ywlC |
-87 : -77 -125 : -117 -231 : -208 -115 : -130 -216 : -209 -187 : -200 -143 : -130 |
_________TTATCCACAAA _________TTATCCACA ..CGTTCTGTTATCCACA __________TATCCACATGTGGACA __________TATCCACA ___CACAAGTTATCCAC ___ACATACTTATCCAC |
|
H S H S S H S H S H S H |
DNA replication none none DNA replication DNA replication, [ clustered together with yqeG in #16 ] none, [ clustered together with dnaA in #16 ] none |
|
#25 |
(ylbN) (ylbM) rpoB accD phoP |
-62 : -74 -148 : -136 -95 : -79 -53 : -61 -181 : -169 |
______TTTTTTCTTTACA ______TTTTTTCTTTACA AAACCCTTTTTTCTTTT _______TTTTTCTTT _____CCTTTCTCTTTTT |
|
H S H S H S H S S |
none none elongation metabolism of lipids regulation |
|
#26 |
trmU dapF sspD |
-95 : -32 -82 : -63 -9 : -2 |
..CTTTATGAAAAACTGGGATGA.. _____TATGAAAAACGGGGGATAAT ______ATGAAAAA |
|
S S H S |
RNA modification metabolism of amino acids and related molecules sporulation |
|
#27 |
qoxA fruR abrB |
-153 : -129 -174 : -160 -60 : -52 |
AATTTTTGTCGATTTTATGACATTT _ATTTTTGTCGAATTT _____TTGTCGAAT |
Spo0A |
H H H S |
membrane bioenergetics regulation regulation |
|
#28 |
glpD csgA |
-50 : -30 -87 : -75 |
GCTGTTGTGGTCTCTTTTTCT ________TGTCTCTTTTTTT |
|
H S |
specific pathways sporulation |
|
#29 |
aroF aroA |
-41 : -21 -138 : -125 |
TCTTACTTAAAAGCGTTAATG ____ACTTAAAAGCGTTT |
|
S H |
metabolism of amino acids and related molecules metabolism of amino acids and related molecules |
|
#30 |
yclN yfhC |
-98 : -79 -41 : -26 |
AATGATAATGATAATCAATT _____AAATGATAATCATTTT |
|
H H |
transport/binding proteins and lipoproteins none |
|
#31 |
rplM ydhG ydhG |
-18 : -7 -17 : -6 -215 : -197 |
___TTTAGGAGGGGA __TTTTAGGAGGGA AGTTTTAGAAGGAAAGAGC |
|
H S H H |
ribosomal proteins none none |
|
#32 |
ydeT ydeT ylpC yvgX |
-164 : -180 -31 : -20 -52 : -23 -37 : -27 |
CGTCATTATATAAACTT _____TTATATATTGAT ____ATTATATACTACTATTAGT.. ___TTTTATATACC |
|
H H S H S H |
regulation regulation none transport/binding proteins and lipoproteins |
|
#33 |
spoIIGA spoIIGA |
-126 : -109 -85 : -70 |
___AGCAGA-TTTCCCTGAAAA ATTGACAGACTTTCCC |
Spo0A Spo0A |
S H S |
sporulation sporulation |
|
#34 |
pyrR pyrP |
-129 : -107 -153 : -139 |
AGTCCAGAGAGGCTGAGAAGGA-T AATCCAGAGAGGTTG |
PyrR PyrR |
H H S |
regulation transport/binding proteins and lipoproteins |
|
#35 |
yqiC mrpF |
-65 : -40 -34 : -19 |
ACATGACATTTGAAGAAGCGATGAAA ______CATTTGAAAAAGCCAT |
|
S H |
metabolism of nucleotides and nucleic acids detoxification |
|
#36 |
thiC ylmB |
-180 : -147 -136 : -123 |
_GGACCTGATCTGGTTCGTACCA.. TTGACCTGATCTGG |
|
H H |
metabolism of coenzymes and prosthetic groups metabolism of amino acids and related molecules |
|
#37 |
xpt ilvB ripX bglP ileS |
-35 : -22 -81 : -71 -33 : -22 -114 : -98 -41 : -33 |
___ATGCTTTTTTTATT _____GCTTTTTTTAT _____TCTTTTTTTACC ATTTAGGTTTTTTTATT _____GCTTTTTTT |
|
S H S H S H H S |
metabolism of nucleotides and nucleic acids metabolism of amino acids and related molecules phage-related functions transport/binding proteins and lipoproteins aminoacyl-tRNA synthetases |
|
#38 |
hit (hit) (ecsA) ecsA |
-148 : -163 -202 : -218 -173 : -152 -283 : -270 |
__________AGCACCTCATTTGTCA ______GATAAACACCTCATTTG GTCTTTGACAAACACCTCATTT __________AACACCTCATTT |
|
S S S S |
adaptation to atypical conditions adaptation to atypical conditions transport/binding proteins and lipoproteins transport/binding proteins and lipoproteins |
|
#39 |
proB valS |
-64 : -54 -71 : -62 |
TTCGTCCTTAT TTCGTCCTTT |
|
H S H S |
metabolism of amino acids and related molecules aminoacyl-tRNA synthetases |
|
#40 |
yrvE yneE yjbD rpsJ |
-33 : -20 -54 : -36 -91 : -84 -207 : -188 |
___TCTAGTATAATAGG TTCTTTTGTATAATAGAGA _______GTATAATA ______TGTATAATAAAAAAAGTGTG |
|
H S S H S H |
DNA recombination none none ribosomal proteins |
|
#41 |
ylqF dnaB |
-111 : -97 -95 : -83 |
AACAAGCTCTTTTTT __CTAGCTCTTTTCT |
|
H H S |
none DNA replication |
|
#42 |
(nadB) (nifS) yrvO |
-50 : -26 -54 : -77 -20 : -36 |
TTGTGTAAATATAGGTGTCAAGACA _TGTGTAAATATAGGTGTCAAGACA _____TAAATATAGAACATATA |
SigA SigA |
H H S H S |
metabolism of coenzymes and prosthetic groups metabolism of coenzymes and prosthetic groups miscellaneous |
|
#43 |
ytfP ytmQ argC carA |
-117 : -83 -155 : -132 -67 : -40 -39 : -54 |
..CGGGCGTTTTTTATACAGCGC _______CGTTTTTATACAT-GG.. TTGAATTAATTTTTATTCA-TGT.. ____ATGAATTTTTATGCCT |
AhrC |
S H H S H S |
none none metabolism of amino acids and metabolism of amino acids and |
|
#44 |
tsf tsf |
-74 : -56 -83 : -93 |
G-CCTTTTATCACCTTTTTT ______TTATCACCTTT |
|
H S H S |
elongation elongation |
|
#45 |
cysE cysE |
-57 : -43 -70 : -82 |
_CAGAGACGCTTTTTT ACAGAGACGCTTT |
|
H S H S |
metabolism of amino acids and related molecules metabolism of amino acids and related molecules |
|
#46 |
(ywjE) (ywjF) ykuF ysiA ysiA |
-58 : -78 -97 : -77 -38 : -15 -44 : -37 -32 : -24 |
___TGACTGAACACTCATTCATTA ___TGACTGAACACTCATTCATTA TATTGAATGAATAATCATTCACAA __ATGAATGA ______________TCATTCATT |
|
H H H H S H S |
metabolism of lipids membrane bioenergetics specific pathways regulation regulation |
|
#47 |
yvfK bglS msmX mfd |
-51 : -24 -34 : -19 -22 : -35 -48 : -34 |
..T-TAAAGCGCTTTCAT __TAGAAAACGCTTTCAA ____GTAAACGCTTTCTT _GACCAAAGCGTTTTT |
CcpA CcpA |
H H H S H S |
transport/binding proteins and specific pathways transport/binding proteins and lipoproteins elongation |
|
#48 |
mntA yqgU rnmV |
-119 : -104 -61 : -50 -40 : -52 |
GGGAAACTTTTTGTCC CTGAAACTTTTT _TGAAACTTTTTCT |
MntR |
H H S |
transport/binding proteins and lipoproteins none RNA modification |
|
#49 |
ydfM yeaB |
-129 : -102 -73 : -58 |
..CAACGTTGCTATAGACCCACTC.. _____TGTTTCTGTAGACCCA |
|
H S |
transport/binding proteins and lipoproteins transport/binding proteins and lipoproteins |
|
#50 |
ybxA gcvT ykvJ hutH |
-75 : -64 -55 : -42 -115 : -101 -51 : -39 |
_ATGCCCTTTTTT TCTGTCCTTTTTTG TACGGCCTTTTTTAT ___CTCCTTTTTGTAT |
|
H S H S S H S |
transport/binding proteins and lipoproteins metabolism of amino acids and related molecules detoxification metabolism of amino acids and related molecules |
|
#51 |
rplK rplA |
-54 : -43 -44 : -35 |
TGAGTGGGAGGG ___GTGGGAGGT-T |
|
H S H S |
ribosomal proteins ribosomal proteins |
|
#52 |
kduI araA odhA |
-72 : -52 -39 : -28 -101 : -88 |
ATTTTCTTTGAAACCGTTACC ______TTTGAAAGCGTT ______GTTGGAAGCGTTTT |
|
H H H |
specific pathways, [ close to araA on metabolic pathway ] specific pathways, [ under glu TCA cycle, [ likely to be unde |
|
#53 |
prfA acsA |
-47 : -25 -47 : -34 |
TATACTATAATGAGAATGTTACG TATACTATAATAAT |
SigA |
H H |
termination specific pathways |
|
#54 |
rpsD rpsP |
-186 : -173 -31 : -22 |
CTTTGTGTGAAATA __TTGT-TGAAAT |
|
H H S |
ribosomal proteins ribosomal proteins |
|
#55 |
yciA yciC |
-46 : -30 -36 : -23 |
A-ATAAATAGTAATTATT ____AAATCGTAATCATT |
Zur |
H H |
none transport/binding proteins and lipoproteins |
|
#56 |
yabM yuiD ybbP |
-82 : -69 -116 : -105 -91 : -80 |
_TGTGGTATAATAAC __ATGGTATAATAG ATGTGGTATAAT |
|
H H H S |
transport/binding proteins and lipoproteins none none |
|
#57 |
ysdB pgi parE |
-74 : -60 -45 : -32 -131 : -117 |
_AGAAAAAGTGAAACC ____TAAAGTGAAAGATG ACTGAAAAGAGAAAG |
SigW |
H H S H |
none main glycolytic pathways DNA packaging and segregation |
|
#58 |
pdhA metK yusC |
-139 : -128 -133 : -122 -70 : -55 |
_ATAAAAGGTTTT __GAAAAGGTTTTT GCAGAAAGGCTTTTCT |
|
H H S H |
main glycolytic pathways metabolism of amino acids and related molecules transport/binding proteins and lipoproteins |
|
#59 |
bglP sucC |
-255 : -239 -57 : -42 |
____AAATGAAAGCGTTGACA TATAGAATGAAAGCGC |
CcpA |
H S |
transport/binding proteins and lipoproteins TCA cycle, [ under glucose rep |
|
#60 |
rocF pcrB ydbS |
-54 : -42 -48 : -37 -121 : -109 |
_TCTTTGTTATAAC ___TTTGTTATAATG TGATTTGTTATTC |
|
S H S S |
metabolism of amino acids and related molecules miscellaneous none |
|
#61 |
yckC ptsG |
-118 : -105 -114 : -125 |
GTCAAGAGGCATGA __AAAAAGGCATGA |
|
H H S |
none transport/binding proteins and lipoproteins |
|
#62 |
yvcI (nudF) (yqkF) |
-229 : -211 -68 : -57 -192 : -203 |
AAGTAATTGACCCCCTTTT _________GCCCCCTTTTGC _________GCCCCCTTTTGC |
|
H S S S |
DNA restriction/modification and repair specific pathways specific pathways |
|
#63 |
rpsD yloI |
-49 : -29 -54 : -37 |
AGACGGTTTTTATTTTCCA-CA __TAGGTTGTTATTTTTTTC |
|
H H S |
ribosomal proteins metabolism of coenzymes and prosthetic groups |
|
#64 |
ilvB leuS |
-280 : -262 -240 : -228 |
_AACTCGCCTCAGAGTGCCA GAACTCACCTCAG |
|
H S S |
metabolism of amino acids and related molecules aminoacyl-tRNA synthetases |
|
#65 |
bkdAA yvgZ ywrD |
-45 : -23 -85 : -71 -149 : -133 |
GATGGCAAAGCCATTCATTTTTA ____________ATTCATTTTTTG.. ______ATAATTTTTCATTTGTT |
|
H S H H S |
metabolism of lipids none metabolism of amino acids and related molecules |
|
#66 |
(ezrA) (hisJ) ydcD |
-116 : -89 -81 : -108 -68 : -55 |
TTACATGGTATCATAATAACAATG.. TTACATGGTATCATAATAACAATG.. __TAATGGTATCATTA |
|
S S S |
cell division metabolism of amino acids and related molecules none |
|
#67 |
(ydeD) (ydeC) tig mutS yloC |
-26 : -43 -87 : -70 -196 : -174 -55 : -47 -78 : -67 |
ATAATAGTGTTATAATAA ATAATAGTGTTATAATAA _____TATGTTATAATATAGTGGT.. _______TGTTATAAT ____ATATGATATAAT |
|
H H H H S S |
none regulation protein folding DNA restriction/modification and repair none |
|
#68 |
yunB yqfZ |
-39 : -25 -47 : -33 |
CTTACAAGCATACAT _GGACAAGCATACTAT |
|
S S |
none none |
|
#69 |
uppS yneP yuxL |
-80 : -66 -120 : -109 -73 : -60 |
AGGGGGTTTTTTTGT ___TGGTTTTTTTCT __CGCTTTTTTTTGCT |
|
H S S |
metabolism of lipids none metabolism of amino acids and related molecules |
|
#70 |
gmk gmk |
-79 : -48 -153 : -139 |
TCTGCGCCAATCAAACGGATGATT.. _______CGATTAAACTGATTA |
|
H H |
metabolism of nucleotides and nucleic acids metabolism of nucleotides and nucleic acids |
|
#71 |
ytsP yhcQ |
-275 : -246 -22 : -7 |
_TAGAAAAAGTGAGGGTT-TTCCA.. GAAAAAAAAG-GAGGAA |
|
S H |
none none |
|
#72 |
yusC yeaB |
-122 : -99 -124 : -111 |
GCTTTGAAAGATGAGAGAAAGGCA __________ATGAGAGAAAAAGT |
|
H S |
transport/binding proteins and lipoproteins transport/binding proteins and lipoproteins |
|
#73 |
ykuL purE dacB |
-102 : -91 -47 : -34 -94 : -81 |
TCTTTTTTATTG TATTTTTTATTTTC __TTTTTTATGTTTGC |
|
S H H |
none metabolism of nucleotides and nucleic acids cell wall |
|
#74 |
yosT kduI |
-43 : -29 -134 : -120 |
_ATTTTTAATCATATT TTTTTTTAATAATAT |
|
H H |
none specific pathways |
|
#75 |
glcR yvgL |
-45 : -28 -39 : -22 |
ACTTATAATTACTTATAA AGTTATAATTAGTTATAT |
|
H H |
regulation transport/binding proteins and lipoproteins |
|
#76 |
dnaJ vpr |
-105 : -82 -38 : -19 |
CTTGGCTTTGACTTTTTTTCTTGC ____TCTTTCACATTTTTTCTAAA |
|
S H |
adaptation to atypical conditions metabolism of amino acids and related molecules |
|
#77 |
clpX smpB |
-97 : -84 -64 : -53 |
TATGGTAAAAT-GC-A TTTGGTAAAATA |
|
S S |
adaptation to atypical conditions protein modification |
|
#78 |
argC yraN ydeC |
-86 : -70 -78 : -63 -37 : -24 |
____AAAAATAT-TAAATATAC __AATAAAATATAAGTTT ATGAAAAAATATAA |
AhrC |
H S H H |
metabolism of amino acids and related molecules regulation regulation |
|
#79 |
ydhM (ywhE) (speE) |
-75 : -36 -110 : -102 -92 : -100 |
ATAAAAGTATAGACATTTAAAATT.. ____AAGTATAGA ____AAGTATAGA |
|
H H S H S |
transport/binding proteins and lipoproteins cell wall metabolism of amino acids and related molecules |
|
#80 |
cysH mtrA |
-297 : -282 -48 : -38 |
AATTGTGCTAAAATTT ___TGTGCTAGAAT |
|
S H S |
metabolism of amino acids and related molecules metabolism of coenzymes and prosthetic groups |
|
#81 |
ytoI comGA |
-43 : -31 -154 : -144 |
CCTTATAATAAAA __TTATAATGACA |
|
S H S |
none transformation/competence |
|
#82 |
yitJ yjcI |
-76 : -53 -58 : -43 |
TGACAAAGTCTTCTTCTTA-AGAGG ____AACCCCTTCTTCTTAT |
|
S H |
none metabolism of amino acids and related molecules |
|
#83 |
pta yrhP |
-235 : -218 -41 : -30 |
T-TCACTATACCATAGTTT __TCACTATATGAT |
|
S S |
specific pathways transport/binding proteins and lipoproteins |
|
#84 |
hisZ yuiF |
-64 : -43 -30 : -15 |
ATATTAGCGAACTAAAGGATTC ________AAACTAAAGGATTTTT |
|
H H |
aminoacyl-tRNA synthetases none |
|
#85 |
lexA ytsC |
-139 : -124 -78 : -70 |
AGGAATGTTTGTTCGC _____T-TTTGTTCG |
LexA |
H H S |
regulation transport/binding proteins and lipoproteins |
|
#86 |
ylxM iolD |
-38 : -11 -159 : -137 |
..GGGATTTGACTTAACAAAGGG ______ATTCGCTTAACAACTGCG.. |
|
H S S |
none specific pathways |
|
#87 |
sigG sdhC |
-67 : -53 -180 : -171 |
GTGCATATTTTTCCC ____AAATTTTTCA |
SigG |
H S H S |
initiation TAC cycle |
|
#88 |
serS leuS |
-56 : -38 -110 : -99 |
TGGGGATGAGGGCTCTTTT TTGGGATGAGGG |
|
H S H S |
aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases |
|
#89 |
(gcvT) (yqhH) rpsF |
-231 : -213 -211 : -229 -38 : -50 |
AGGCGCCGAAGGAGCAAAC AGGCGCCGAAGGAGCAAAC ____GGGCAAGGAGCAA |
|
S H S H |
metabolism of amino acids and related molecules DNA recombination ribosomal proteins |
|
#90 |
(ypbB) (fer) polA |
-60 : -47 -206 : -219 -73 : -61 |
TCTGTTAAAATAAA TCTGTTAAAATAAA T-TGTTAAAATAAG |
|
H H H |
none membrane bioenergetics DNA replication |
|
#91 |
(sppA) (ytdI) yclA |
-54 : -41 -132 : -145 -54 : -65 |
_ATTTTTCATATTGA _ATTTTTCATATTGA TATTTTTCATAT |
|
H H S |
protein modification none regulation |
|
#92 |
(yrrT) (yrzA) yrzA |
-17 : -33 -174 : -160 -48 : -28 |
_____ATTTAATAATTCCTATA _______TTAATAATTCCTATA AAAAAAGCTTATACTTCATAT |
|
S S S |
none none none |
|
#93 |
ylbH ylxS |
-256 : -197 -154 : -124 |
..AACTTATGGGGAAACGTAAGTC.. __AAAGAGTGGGGAAACCCGCTCT.. |
|
H H |
none none |
|
#94 |
yjcH yitJ |
-198 : -183 -176 : -189 |
_GGGCCAGT-CCCTCCAC CGGGCCAGTCCCTC |
|
S S |
none none |
|
#95 |
yhdE ypfA deoD |
-68 : -57 -70 : -55 -114 : -97 |
____TTCCTTTTTTTT GTCTTTTCCTTTTTTT __CATTTCTTTTTTCGATAT |
|
H S S S |
none none metabolism of nucleotides and nucleic acids |
|
#96 |
yeaD yuxG nusB |
-300 : -262 -74 : -95 -237 : -218 |
..CTGGTTTTTGTTTTAC ______TTTTTGTTTATTTTTGCT.. CTTTGGTTTTTTT |
|
S H S |
none specific pathways termination |
|
#97 |
yqgN ydeM |
-109 : -80 -42 : -24 |
..ACACCGTGAAACAAAATAA-CA.. _____AAAATAAACAAAATAGACA |
|
H S |
metabolism of coenzymes and prosthetic groups none |
|
#98 |
mrpA veg |
-173 : -157 -74 : -60 |
AAAGTGCGATATAATTT __ACGTTGATATAATTT |
|
H H |
transport/binding proteins and lipoproteins miscellaneous |
|
#99 |
yugT tdk |
-108 : -93 -56 : -45 |
CAAACGGCTGTTTTTT ____TGCCTGTTTTTT |
|
S H S |
specific pathways metabolism of nucleotides and nucleic acids |
|
#100 |
fabHB spoIIP |
-106 : -93 -42 : -30 |
_TTTTCATAGATTCC TTGTTCATAGAGT |
sigE |
H H |
metabolism of lipids sporulation |
|
#101 |
sapB ytsA |
-63 : -52 -45 : -35 |
TTTTGCTATAAA TTTTGCTATAC |
|
H H S |
miscellaneous regulation |
|
#102 |
ruvA yjcH |
-39 : -23 -57 : -46 |
TTATGGTACAATGAAGA __ATGGTACAATAA |
|
H H S |
DNA recombination none |
|
#103 |
ywkC rpoB |
-94 : -77 -62 : -47 |
CCACTTTCTTTGCCGAAT _TTCTTTCTTTGGAAGA |
|
H S H |
none elongation |
|
#104 |
rnpA yphA |
-116 : -103 -78 : -88 |
ATGGGAAAAGATAG ATGGGAAAAGA |
|
H S |
RNA modification none |
|
#105 |
rnpA ywaC |
-140 : -124 -117 : -106 |
ATGTCAGTGGTCTTTTT ________GGTCTTTTTTTG |
|
H H |
RNA modification metabolism of nucleotides and nucleic acids |
|
#106 |
spoIIIE lepA |
-102 : -91 -53 : -44 |
TATGCTATAATA _TTGATATAAT |
|
H H S |
sporulation elongation |
|
#107 |
mta lcfA hepS arfM |
-109 : -98 -76 : -62 -104 : -94 -139 : -123 |
__________TTTCTTTTATAC __CCTTTCTTTTTCTTT ____TTCTTTTTTTT ATCCTCCTTTTTTCTTT |
|
H S S H S |
regulation metabolism of lipids metabolism of coenzymes and prosthetic groups regulation |
|
#108 |
gatB sspO |
-134 : -106 -174 : -157 |
..CAAAAATTTTCTCAAGC __TCACAATTTTCTCACAAT |
|
S H |
aminoacyl-tRNA synthetases sporulation |
|
#109 |
clpP polA |
-225 : -209 -93 : -80 |
TAATTCCTTTCAAATAA _TTTTCCTTTCAAAT |
|
H H |
adaptation to atypical conditions DNA replication |
|
#110 |
alaS metS |
-62 : -47 -36 : -27 |
AGGGGGAGGGCTTTTT _____GGGAGCTTTT |
|
H H S |
aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases |
|
#111 |
(yjbL) (yjbK) yukF |
-45 : -30 -80 : -94 -24 : -10 |
ATATGATAAAATGAAT ATATGATAAAATGAA TCATAATAAAAGGAA |
|
H H S S |
none none none |
|
#112 |
valS proB tyrS serS |
-244 : -232 -223 : -215 -248 : -237 -229 : -221 |
TGCAGAGAGAG-AA GACAGAGAG TCCAGAGAGCTG _TAAGAGAGC |
|
H S H S S H S |
aminoacyl-tRNA synthetases metabolism of amino acids and related molecules aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases |
|
#113 |
yqeC lcfA |
-119 : -105 -92 : -83 |
TGAAAAATAAAATTT _GAAAAAGAAA |
|
H H S |
main glycolytic pathways metabolism of lipids |
|
#114 |
yurY citS |
-49 : -28 -61 : -45 |
AATGAGAATAAAATGAGAATAA ________AAAAATGAGAAAATTCC |
|
H S H |
transport/binding proteins and lipoproteins sensors (signal transduction) |
|
#115 |
spoIIQ yshC |
-73 : -60 -55 : -43 |
TAAAAAAGTTTTTT __GAGAAGTTTTTTT |
|
H S H |
sporulation DNA restriction/modification and repair |
|
#116 |
yuxN ywhE |
-265 : -245 -45 : -32 |
CATTTTTTCTC-TGACAAGGTC __TTTTTTCTCATAAT |
|
S S |
none cell wall |
|
#117 |
ydeT ydeT |
-46 : -40 -191 : -185 |
TATATAA TATATAA |
|
H S H S |
regulation regulation |
|
#118 |
ydeB yqzD |
-43 : -4 -36 : -20 |
..TAAGAAGGATACCATATATGGA.. __AAAGAAGGATACAAAAA |
|
H H |
regulation none |
|
#119 |
pbuG xpt |
-203 : -194 -155 : -147 |
GGAATATGGC _GGATATGGC |
|
H S H S |
transport/binding proteins and lipoproteins metabolism of nucleotides and nucleic acids |
|
#120 |
rpsD spoVAA |
-78 : -60 -58 : -41 |
______AAAACAAAATGTGCATGGT GAATGAG-AACAAAATCGA |
|
H S |
ribosomal proteins sporulation |
|
#121 |
purR yprA |
-26 : -15 -39 : -33 |
AATATTCGGATT AATATTC |
|
H S H S |
regulation DNA restriction/modification and repair |
|
#122 |
ackA gcaD |
-128 : -122 -65 : -59 |
CTTGAAA CTTGAAA |
SigA |
H S H S |
specific pathways cell wall |
|
#123 |
(yqhR) (yqhQ) ykvJ |
-147 : -155 -80 : -72 -172 : -162 |
__TAGAGGTTT __TAGAGGTTT GGGAGAGGTT-C |
|
H S H S H S |
none none detoxification |
|
#124 |
ydcK yrrK |
-191 : -162 -258 : -240 |
..TTCAGCAGTTTAATTT AACGATGAAATTTAATTT |
|
H S H S |
none none |
|
#125 |
(yjbE) (mecA) rapG |
-128 : -145 -147 : -132 -83 : -66 |
__GTTTTATCATAAAATAGA ___TTT-ATCATAAAATAGA AGGATTTTACATAAAATA |
DegU |
H H S H |
none transformation/competence sporulation |
|
#126 |
nusB yshA |
-65 : -50 -46 : -35 |
AAATATGTTATGATCT ___CGTGTTATGATA |
|
H S H |
termination none |
|
#127 |
yhbH safA cotE |
-107 : -91 -19 : -9 -40 : -32 |
TATGTGCATATGATGAA ____TGCATAGGAGG _____GCATAAGAT |
SigK |
H S H H S |
none sporulation sporulation |
|
#128 |
ytkK pbuG |
-108 : -96 -278 : -269 |
TTTTTTTGTATGC ___TTTTGTATTG |
|
S H S |
metabolism of lipids transport/binding proteins and lipoproteins |
|
#129 |
ywfK sdhC |
-64 : -47 -106 : -95 |
ATATGAGTACAATAAAGA ___GGAGTAAAATGA |
SigA |
S H S |
regulation TAC cycle |
|
#130 |
ytkK ctsR |
-66 : -48 -52 : -40 |
TTTATAGTAAAGTAGAAGA __TATAGTAAGATTA |
|
S H S |
metabolism of lipids regulation |
|
#131 |
yjbD acuA |
-67 : -48 -102 : -93 |
TTTTAGAGTAATTTCAATTT __________TTCTCAATTT |
|
S H S |
none specific pathways |
|
#132 |
rplJ yqhH |
-164 : -145 -104 : -95 |
CTTAATTATCCTACCGAGGT ______TATCCTACCA |
|
H S H S |
ribosomal proteins DNA recombination |
|
#133 |
maf ecsA |
-59 : -48 -39 : -28 |
ATTTGGTAGGAT _TTTGGTACTATG |
|
H S H S |
cell division transport/binding proteins and lipoproteins |
|
#134 |
ykvJ sdhC |
-251 : -231 -119 : -131 |
ACTTTTTTATTGTCAAGAAAA _________GCGTCAAGAAAAC |
SigA |
H H S |
none TAC cycle |
|
#135 |
divIB divIB |
-88 : -71 -54 : -65 |
AAACGAACAAACGGCATC _____AACAAACGGCAT |
|
S H S |
cell division cell division |
|
#136 |
(yloB) (yloA) yllA |
-85 : -69 -31 : -47 -44 : -59 |
___ATTATAGCATGAAATGG ___ATTATAGCATGAAATGG ATGAGTATAGCATGTT |
|
H H S |
transport/binding proteins and lipoproteins adaptation to atypical conditions none |
|
#137 |
ykrT ykrT |
-56 : -36 -59 : -71 |
TCTGAGAAGGAGGCTTTTTTA _____GAAGGAGGCTTAA |
|
S S |
none none |
|
#138 |
yjdA yheC |
-116 : -100 -136 : -148 |
__AAGCTGATTTTAAAATG ACAAGCTGATTTT |
|
H S |
metabolism of lipids none |
|
#139 |
(ypjD) (ypjC) ydfS |
-267 : -210 -95 : -144 -19 : -30 |
..TCAGCCAGATTGTTCTGCATAT.. ..TCAGCCAGATTGTTCTGCATATT ____TCCCAGATTGTT |
|
H S S H |
none none none |
|
#140 |
(ezrA) (hisJ) hemE |
-138 : -120 -59 : -77 -101 : -113 |
ATTTCTGGTCAAAAAATGT ATTTCTGGTCAAAAAATGT ________TCAAAAAATCGCC |
|
S S H S |
cell division metabolism of amino acids and related molecules metabolism of coenzymes and prosthetic groups |
|
#141 |
(yqeW) (rpsU) rpsF |
-94 : -82 -70 : -82 -85 : -69 |
___ATTATAATATAAG ___ATTATAATATAAG TTTGGTATAATATAAAA |
|
H H H |
transport/binding proteins and lipoproteins ribosomal proteins ribosomal proteins |
|
#142 |
(rpsT) (gpr) soj |
-86 : -73 -118 : -131 -54 : -35 |
_TTTGATAGAATACA _TTTGATAGAATACA TTTTGATAGAATAGA-AGCAA |
|
H H H |
ribosomal proteins germination sporulation |
|
#143 |
perR yesO |
-58 : -21 -85 : -63 |
..AAACATTACAATGTAAGAATTT.. ___AAAATAA-AATGTAAGCACTT.. |
|
H H |
regulation transport/binding proteins and lipoproteins |
|
#144 |
xpt rsbR |
-85 : -67 -84 : -72 |
GTACGGTTTTTTGTGATAT ____CTTTTTTTGTTTT |
SigA |
H H |
metabolism of nucleotides and nucleic acids adaptation to atypical conditions |
|
#145 |
sspF metE |
-145 : -129 -205 : -195 |
TTTGTTTACTGCTTTTT _____GCACTGCTTTT |
|
S H |
sporulation metabolism of amino acids and related molecules |
|
#146 |
yqxK glyA |
-269 : -236 -82 : -66 |
..ACATTCATATCGGCCGGACC ___CTTTTACATCGGCCTTA |
|
S S |
none metabolism of amino acids and related molecules |
|
#147 |
ygaH ytsC |
-175 : -154 -54 : -65 |
TCATCAAATTCTTTTCCTTCTA ___________TTTTCCTTCGAT |
|
S H S |
none transport/binding proteins and lipoproteins |
|
#148 |
serS yfkD |
-185 : -171 -51 : -63 |
GAATCCATCCTTGAG TTATCCATCATTT |
|
H S H |
aminoacyl-tRNA synthetases none |
|
#149 |
yhzC proB |
-170 : -157 -247 : -236 |
AAATGACTAGTAAT ___GGATTAGTAAGC |
|
H H S |
none metabolism of amino acids and related molecules |
|
#150 |
msmR yuiA |
-90 : -73 -98 : -89 |
ATTATTGTAACCGCTTAC _________TCCGCTTACA |
|
H H S |
regulation none |
|
#151 |
comGA ldh |
-86 : -71 -50 : -43 |
ATAACATCTCACAAAA _______TTCACAAA |
|
S H S |
transformation/competence membrane bioenergetics |
|
#152 |
yvcI ywlE |
-161 : -154 -43 : -36 |
TTTTTTGT TTTTTTCT |
|
H S H S |
DNA restriction/modification and repair protein modification |
|
#153 |
gcaD yvsG |
-30 : -19 -20 : -13 |
ATGGATAAAAGG ___GATAAAAG |
|
H S H S |
cell wall none |
|
#154 |
leuS alaS |
-195 : -187 -159 : -152 |
CTGCGTTAA CTGCGTTA |
|
H S H S |
aminoacyl-tRNA synthetases aminoacyl-tRNA synthetases |