Alignment of three sequences

abrB ackA acoA acpA acsA acuA adeC adk ahrC alaS
ald ampS appB appD aprX argC argG aroB aroF aroI
asd asnS atpG bcsA bfmBAA bsaA carA ccpA cdd cheR
citG clpX cmk codV comEA comEB comER comFA comGA comGB
cotD cotE cotK csbA csfB ctaC ctc ctrA ctsR cwlC
cwlD cwlJ cysE cysH cysK dal dapG ddlA degS degU
dinG divIB divIVA dnaA dnaB dnaC dnaD dnaE dnaJ dnaN
dnaX dps drm ecsA flgB flgM flhO fliH folC fruR
ftsE fus galE galK gcaD gerCA gerE gerM glnA gltT
gltX glyA greA grlB gtaB guaA gyrA gyrB hag hemA
hemE hemH hemN hisS hit hmp hrcA hutH ileS ilvA
ilvB ilvD infA iolA iolD iolI lcfA lctE lepA leuS
licB lonB lsp lysA lysS lytR maf mbl mecA metB
metK metS mfd miaA minC mmgB mobA mraY mreBH msmR
msmX mta mtrA murC murF murZ mutS narQ nasD ndk
nifS nifZ nusG opuCA pabB panB patB pckA pcp pdhC
pfk pgi pgk pgsA pheB phoA phoP pnbA pnpA polA
polC ppiB prfA prkA proB pta ptsG ptsH purC purM
purR pycA pyrB pyrP qcrA queA rbsR resD rho ribT
ripX rnh rocD rocF rph rplA rplJ rplK rplM rplQ
rpmG rpmH rpoB rpoC rpoE rpsP rpsS sapB sbcD sdhC
secA secF serS sigA sigE sigG sigW smbA smc sms
sodA splB spo0A spo0F spoIIAA spoIIE spoIIGA spoIIIAA spoIIIJ spoIIM
spoIIQ spoIIR spoIVA spoIVFA spoVB spoVC spoVD spoVE spoVFA spoVG
spoVID spoVM spoVS spoVT sspB sspD sspF sucC tdk thdF
thrS tnrA topA topB treA trpE trpS truB trxA trxB
tsf upp ureA uvrB uvrC valS xpt xylB xylR yaaA
yaaD yaaH yaaJ yaaO yabB yabD yabF yabG yabH yabP
yabS yabT yacA yacB yacC ybaL ybbK ybbP ybxA ybxB
ybxF ycbP ycdI yciC yckC yclM ycsF ycsN ydbF ydbM
ydbS ydcA ydcB ydcD ydcK ydeI ydeT ydfS ydiG yeaD
yebB yefA yerA yerE yerF yerL yerN yerO yerQ yfhB
yfhF yfhG yfhP yfhS yfiB yfiD yfiL yfiT yfjO yfjP
yfkB yfkJ yfkK yfkM yflF yflK yflM yflN ygaC ygaE
ygaF yhaA yhaL yhaQ yhbH yhdE yhdF yhdJ yhdO yhdZ
yheA yheB yheE yheI yheM yhfA yhfR yhgD yhgE yisK
yisL yisN yisO yitJ yitU yitV yitW yjbA yjbD yjbG
yjbH yjbI yjbJ yjbK yjbO yjbP yjcA yjcH yjcI yjjA
yjoA yjzC ykkE yknW ykoG ykqB ykrA ykrB ykrT yktA
ykuD ykuI ykuL ykuR ykuS ykvJ ykvW ykvY ykwC ykwD
ykzG ykzI ylaG ylaH ylaK ylaL ylaM ylaN ylbA ylbB
ylbD ylbF ylbG ylbI ylbJ ylbK ylbM ylbN ylbO ylbQ
yllA ylmA ylmC ylmH yloA yloB yloC yloI yloW ylpC
yluB ylxA ylxM ymfB ymfC ymfG ymfH ymfI ymfJ ymfK
ymfM ymxH ynbB yndB yneE yneK yneP yneT yngD yngG
ynzD yoaI yoaT yodH yojE yojF yojG ypbF ypbR ypbS
ypdA ypeP ypfA ypfD ypgR yphA yphC yphE ypiA ypiB
ypiF ypjA ypjB ypjC ypjD ypjP ypmA ypmQ yppP yprA
ypsC ypuF ypuG ypuL ypvA ypwA yqeG yqeN yqfC yqfN
yqfP yqfR yqfT yqfU yqfV yqfW yqfX yqfZ yqgB yqgH
yqgP yqgW yqgX yqhH yqhI yqhL yqhM yqhN yqhO yqhQ
yqhR yqhV yqhZ yqiB yqiC yqiE yqiK yqiR yqiW yqjB
yqjC yqjH yqjP yqkF yqkG yqxK yqxN yqzB yqzE yqzF
yraG yrbA yrhF yrhP yrkF yrrA yrrB yrrK yrrM yrvE
yrvI yrvM yrvN yrvO yrzA yrzC yrzD yrzI ysdA ysfA
ysgA ysiA ysmB ytaG ytdI yteA yteI ytfP ytgI ytgP
ythA ytkD ytkK ytkL ytkP ytlP ytmA ytoI ytoP ytpI
ytqI ytrI ytsA ytsC ytsJ ytsP yttB yttI ytvP ytwP
ytxC ytxG ytxK ytzB ytzC yuaF yueE yueJ yugI yugN
yugT yuiA yuiD yuiE yukD yukF yulF yumB yunB yunC
yurO yurY yurZ yusG yusH yusI yusN yusV yutD yutG
yutH yutL yutM yuzA yuzD yuzF yvaB yvaI yvaK yvaM
yvbA yvbH yvbQ yvcE yvcI yvcT yvdD yvdF yvfV yvgM
yvgN yvgR yvgX yvgY yvgZ yviA yvjB yvjD yvoB yvpB
yvsG yvyE yvyF ywcH ywfI ywfM ywfN ywfO ywhE ywhF
ywiC ywiD ywjG ywkC ywlD ywlE ywlF ywnA ywnH ywpB
ywpF ywqB ywrD ywrE ywzB ywzC yxaA yxbD yxiE yxkF
yyaA yybS yycF yydA yyxA

Alignment of two sequences

aadK accB acoR adaA addB adhA ahpC aldY alsT amhX
appA aprE araA araR aroA aroC asnB atpF atpI bglP
bglS blt bltR bmrU bofA cad cah ccdA cgeD cheV
citB citC citS citZ clpE clpP comC cotA cotF cotJA
cotM cotN cotX csaA csbB csgA cspC cspD cstA ctaA
ctaB czcD dacA dacB dacF degQ deoD deoR dhaS dinB
dra fbaA fer fhuB fhuD fliK fliL fnr ftsA ftsH
gapB gerD gerKA gid glcR glcT glmS glnM glnR glpD
glpF glpQ gltA gltC glyQ gpr groES grpE gsaB gspA
guaB gutB hbs hisZ hom hpr htpG hutP infC iolB
ipi ispA kapD katB katX kbaA kdgR kduI lacR lexA
licT lipB lonA lplB lrpC lysC lytE mcpC mdr med
menE metC mmgA moaB mreB mtlA mtlD murE murG mutT
nadB nadE nagA narG narK nasA nasF nprB nrgA odhA
oppA oppB opuD opuE paiA patA pbpA pbpC pbpF pbpX
pdhA pel pheS pksS pmi prfB proH prsA pssA purA
purE pyrR qoxA rapB rapC rapG recA relA resA resC
rncS rnpA rocR rplS rplU rpmB rpmE rpoA rpsB rpsD
rpsF rpsJ rpsL rpsO rpsT rpsU rsbR rsbV rtp ruvA
ruvB sacP sbo serA serC sfp sigH sigL sigV sigY
sinI sipS sleB slp smf sodF soj spo0B spo0E spoIIB
spoIID spoIIIE spoIIP spoIVB spoIVCB spoVAA spoVK sspA sspE tagD
tagG tenA tgl thiA thiD thyB tig tkt tlp tlpA
treP trkA tuaB tuaD tufA tyrS tyrZ usd veg vpr
wprA xhlA xkdA xkdD xre xsa xtmA xylA xynA xynD
yaaC yaaQ yabE yabK yabM yabR yacL ybaK ybaN ybaR
ybaS ybbI ybcI ybcL ybcP ybdN ybdT ybeF ybfA ybfO
ybgA ybgJ ybxI ybyB ycbA ycbG ycbJ ycbL ycbN ycbO
ycbT yccC ycdA ycdH ycgA ycgF ycgH ycgJ ycgM ycgR
yciA yckK yclA yclB yclN ycnG ycnH ycnL ycsA ycsE
ycsG yczA yczB yczE ydaA ydaC ydaO ydaS ydbA ydbE
ydbN ydbP ydbR ydcC ydcF ydcI ydcN ydcO yddR ydeB
ydeC ydeD ydeE ydeG ydeL ydeM ydeP ydeQ ydfB ydfC
ydfD ydfE ydfF ydfK ydfL ydfM ydfR ydgJ ydhB ydhC
ydhD ydhG ydhI ydhJ ydhM ydhQ ydhU ydiA ydiF ydiL
ydjE ydjF ydjG ydjL ydzA ydzE ydzF ydzH yeaB yeaC
yebA yeeF yeeI yerI yerP yesO yesY yetF yetG yetH
yetN yezD yfhC yfhD yfhE yfhJ yfhQ yfhR yfiA yfiO
yfiS yfiY yfiZ yfjM yfjS yfjU yfkA yfkD yfkF yfkN
yfkO yfkQ yflA yflD yflL yflS yfmH yfmI yfmL yfmP
yfmT yfnB ygaD ygaG ygaH ygaJ ygaK ygaL yhaH yhaM
yhaS yhaV yhbB yhcQ yhcT yhcU yhcY yhdB yhdG yhdR
yhdS yhdY yheC yheJ yheK yheL yheN yhfB yhfC yhfI
yhfK yhfO yhfP yhfV yhfW yhjA yhjD yhjG yhjM yhjN
yhjP yhjR yhxA yhxB yhzC yirY yisH yisI yisQ yisS
yisU yisX yitG yitK yitL yitS yitT yjaU yjaX yjaZ
yjbC yjbE yjbF yjbL yjbQ yjbW yjbX yjcC yjcD yjcK
yjcL yjcO yjdA yjdC yjdJ yjeA yjhB yjlA yjmA yjmH
yjmI yjqC ykaA ykcA ykgA ykhA ykkA ykkC yklA ykmA
yknU ykoC ykoJ ykoK ykoL ykoN ykoP ykoQ ykoW ykoY
ykpB ykrK ykrL ykrM ykrQ ykrU ykrV ykrW yktB yktC
ykuC ykuF ykuT ykuU ykuV ykvA ykvE ykvT ykvU ykwB
ykyA ykzB ykzE ykzF ylaF ylaI ylaO ylbC ylbH ylbP
yllB ylmB ylmD ylnD yloD yloS yloU ylqD ylqF yluA
ylxS ylxY ymcB ymdA ymdB ymfA ymfD ymfF ymzB ynaB
ynbA yncB yndD yndG yndN yneF yneI yneJ yneN yneR
yneS yngC yngJ yngL ynzC ynzG yoaE yoaR yobD yobL
yobN yobO yobR yobU yobV yocC yocD yocJ yocR yocS
yodA yodB yodC yodI yodJ yodN yodT yoeC yoeD yogA
yojI yojK yokD yolD yomB yomD yonK yopC yoqE yoqW
yorN yosT yosX yoxA yozA yozB yozC yozD yozE yozI
ypbB ypbD ypbG ypbH ypcA ypdC ypfP yphP ypiP ypmP
ypnP yppD yppF yppG ypqE ypsA ypsB ypuA ypuI ypzA
yqaC yqaJ yqbL yqcJ yqeC yqeD yqeW yqeZ yqfF yqfQ
yqfY yqgC yqgG yqgN yqgO yqgQ yqgT yqgU yqgY yqhS
yqiS yqiX yqiY yqjA yqjK yqjM yqjR yqjS yqjV yqjW
yqkD yqkL yqxD yqxM yqzD yqzH yraA yraH yraN yrbB
yrbC yrbE yrbG yrdA yrdQ yrhA yrhC yrkC yrkD yrkG
yrkH yrkM yrkP yrkS yrpB yrrD yrrI yrrL yrrS yrrT
yrvD yrzE yrzK ysaA yscA ysdB ysdC ysfB ysfC ysfE
yshA yshC yslB ysmA ysnE ysoA ytaA ytaF ytcA ytcD
ytcF ytcG ytcI ytcP ytcQ ytdA ytdP yteV ytfI ytgA
ytiA ytjA ytjB ytjP ytkA ytmB ytmP ytmQ ytnP ytoQ
ytpP ytqA ytrA ytrP yttP ytvI ytwF ytwI ytxD ytxN
ytzA ytzE ytzG yuaA yuaE yuaJ yubA yubB yubF yueH
yueI yufC yufL yufN yufO yufR yufT yugE yugF yugG
yugJ yugO yugP yugU yuiB yuiC yuiF yuiG yukE yulB
yumC yunA yunH yunI yurF yurH yurN yurR yusC yusL
yusM yusW yutB yutC yutI yutJ yutK yuxG yuxJ yuxL
yuxN yuzB yvaL yvaN yvbK yvbU yvcC yvcD yvcP yvcR
yvdA yvdQ yvdT yveM yvfI yvfK yvfO yvfT yvgL yvgP
yvgT yvgW yvjA yvkB yvlA yvqA yvqG yvqJ yvrC yvrK
yvrP yvyC yvyD yvzC ywaA ywaC ywaD ywbF ywbH ywbO
ywcE ywcG ywdF ywdH ywdI ywdL yweB ywfK ywgB ywhB
ywhG ywhH ywiE ywjA ywjE ywjF ywjH ywkD ywlB ywlC
ywmB ywnF ywnJ ywoA ywoB ywoE ywoF ywoH ywpD ywpE
ywpH ywqC ywqE ywqF ywqN ywrC ywrF ywsA ywtF ywzA
yxaB yxaG yxaH yxbF yxiA yxiB yxiO yxiQ yxjC yxjN
yxkO yxlH yxzG yyaB yyaC yyaD yyaF yyaH yybA yybB
yybR yycC yyzB